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scSpatialSIM
View on CRAN: Click
here
Download and install scSpatialSIM package within the R console
Install from CRAN:
install.packages("scSpatialSIM")
Install from Github:
library("remotes")
install_github("cran/scSpatialSIM") Install by package version:
library("remotes")
install_version("scSpatialSIM", "0.1.3.4") Attach the package and use:
library("scSpatialSIM")
Maintained by
Fridley Lab
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[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-10-12
Latest Update: 2024-10-01
Description:
Single cell resolution data has been valuable in learning about tissue microenvironments and interactions between cells or spots. This package allows for the simulation of this level of data, be it single cell or
How to cite:
Fridley Lab (2023). scSpatialSIM: A Point Pattern Simulator for Spatial Cellular Data. R package version 0.1.3.4, https://cran.r-project.org/web/packages/scSpatialSIM. Accessed 13 Aug. 2026.
Previous versions and publish date:
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Other R packages that scSpatialSIM depends,
imports, suggests or enhances
Complete documentation for scSpatialSIM
Functions, R codes and Examples using
the scSpatialSIM R package
Some associated functions: CalculateDensity . CreateSimulationObject . CreateSpatialList . ExtractParameters . GenerateCellPositivity . GenerateDistributions . GenerateHoles . GenerateSpatialPattern . GenerateTissue . PlotSimulation . SummariseSpatial . UpdateSimulationWindow . pipe . plot.SpatSimObj . summary.SpatSimObj . wm .
Some associated R codes: calculate_density.R . cell_distributions.R . create_cells.R . create_holes.R . create_simObject.R . create_summary.R . create_tissue.R . creating_spatial_processes.R . data.R . get_parameters.R . get_spatial_list.R . globals.R . plotting.R . summary.R . update_window.R . utils-helpers.R . utils-pipe.R . zzz.R . Full scSpatialSIM package functions and examples
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