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scPipeline  

A Wrapper for 'Seurat' and Related R Packages for End-to-End Single Cell Analysis
View on CRAN: Click here


Download and install scPipeline package within the R console
Install from CRAN:
install.packages("scPipeline")

Install from Github:
library("remotes")
install_github("cran/scPipeline")

Install by package version:
library("remotes")
install_version("scPipeline", "0.2.0.0")



Attach the package and use:
library("scPipeline")
Maintained by
Viswanadham Sridhara
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-03-07
Latest Update: 2025-03-07
Description:
Reports markers list, differentially expressed genes, associated pathways, cell-type annotations, does batch correction and other related single cell analyses all wrapped within 'Seurat'.
How to cite:
Viswanadham Sridhara (2025). scPipeline: A Wrapper for 'Seurat' and Related R Packages for End-to-End Single Cell Analysis. R package version 0.2.0.0, https://cran.r-project.org/web/packages/scPipeline. Accessed 04 Oct. 2026.
Previous versions and publish date:
(2026-07-09 07:01), 0.2.0.0 (2025-03-07 12:40)
Other packages that cited scPipeline R package
View scPipeline citation profile
Other R packages that scPipeline depends, imports, suggests or enhances
Complete documentation for scPipeline
Functions, R codes and Examples using the scPipeline R package
Full scPipeline package functions and examples
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