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scNPM
View on CRAN: Click
here
Download and install scNPM package within the R console
Install from CRAN:
install.packages("scNPM")
Install from Github:
library("remotes")
install_github("cran/scNPM") Install by package version:
library("remotes")
install_version("scNPM", "1.0.6") Attach the package and use:
library("scNPM")
Maintained by
Tao Liu
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-11-05
Latest Update: 2026-11-05
Description:
Estimates and compares heterogeneous gene conditional-dependence networks from single-cell expression data. A latent Gaussian mixture and probit observation mechanism represent cellular heterogeneity and zero observations. Protein interaction information supplies edge-specific prior weights, while network propensity matching links cell clusters across conditions and guides adaptation. Staged inference freezes stable matching, disables feedback, and retains baseline-model samples for posterior group and directional differential edge selection. Functions assess balance, record criterion diagnostics, and visualize within-condition and differential networks.
How to cite:
Tao Liu (2026). scNPM: Single-Cell Network Propensity Matching. R package version 1.0.6, https://cran.r-project.org/web/packages/scNPM. Accessed 24 Oct. 2026.
Previous versions and publish date:
(2026-10-19 11:10), 1.0.6 (2026-10-14 13:20)
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