Other packages > Find by keyword >

scGOclust  

Measuring Cell Type Similarity with Gene Ontology in Single-Cell RNA-Seq
View on CRAN: Click here


Download and install scGOclust package within the R console
Install from CRAN:
install.packages("scGOclust")

Install from Github:
library("remotes")
install_github("cran/scGOclust")

Install by package version:
library("remotes")
install_version("scGOclust", "0.2.1")



Attach the package and use:
library("scGOclust")
Maintained by
Yuyao Song
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-01
Latest Update: 2024-01-24
Description:
Traditional methods for analyzing single cell RNA-seq datasets focus solely on gene expression, but this package introduces a novel approach that goes beyond this limitation. Using Gene Ontology terms as features, the package allows for the functional profile of cell populations, and comparison within and between datasets from the same or different species. Our approach enables the discovery of previously unrecognized functional similarities and differences between cell types and has demonstrated success in identifying cell types' functional correspondence even between evolutionarily distant species.
How to cite:
Yuyao Song (2023). scGOclust: Measuring Cell Type Similarity with Gene Ontology in Single-Cell RNA-Seq. R package version 0.2.1, https://cran.r-project.org/web/packages/scGOclust. Accessed 16 Jul. 2026.
Previous versions and publish date:
(2026-07-09 07:01), 0.1.0 (2023-06-01 13:50), 0.1.2 (2023-10-02 12:30), 0.2.0 (2023-11-30 11:30)
Other packages that cited scGOclust R package
View scGOclust citation profile
Other R packages that scGOclust depends, imports, suggests or enhances
Complete documentation for scGOclust
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

bbdetection  
Identification of Bull and Bear States of the Market
Implements two algorithms of detecting Bull and Bear markets in stock prices: the algorithm of Pagan ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
tarchetypes  
Archetypes for Targets
Function-oriented Make-like declarative pipelines for Statistics and data science are supported in t ...
Download / Learn more Package Citations See dependency  
schoolmath  
Functions and Datasets for Math Used in School
Contains functions and datasets for math taught in school. A main focus is set to prime-calculation. ...
Download / Learn more Package Citations See dependency  
tibble  
Simple Data Frames
Provides a 'tbl_df' class (the 'tibble') with stricter checking and better formatting than the tradi ...
Download / Learn more Package Citations See dependency  
Rnmr1D  
Perform the Complete Processing of a Set of Proton Nuclear Magnetic Resonance Spectra
Perform the complete processing of a set of proton nuclear magnetic resonance spectra from the free ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA