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rtms
View on CRAN: Click
here
Download and install rtms package within the R console
Install from CRAN:
install.packages("rtms")
Install from Github:
library("remotes")
install_github("cran/rtms") Install by package version:
library("remotes")
install_version("rtms", "0.2.0") Attach the package and use:
library("rtms")
Maintained by
Nathaniel Twarog
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-06-06
Latest Update: 2023-06-06
Description:
Quickly imports, processes, analyzes, and visualizes mass-spectrometric
data. Includes functions for easily extracting specific data and measurements
from large (multi-gigabyte) raw Bruker data files, as well as a set of S3 object
classes for manipulating and measuring mass spectrometric peaks and plotting
peaks and spectra using the 'ggplot2' package.
How to cite:
Nathaniel Twarog (2023). rtms: R Toolkit for Mass Spectrometry. R package version 0.2.0, https://cran.r-project.org/web/packages/rtms. Accessed 08 Aug. 2026.
Previous versions and publish date:
No previous versions
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View rtms citation profile
Other R packages that rtms depends,
imports, suggests or enhances
Complete documentation for rtms
Functions, R codes and Examples using
the rtms R package
Some associated functions: closeBrukerMCFReader . emptySampleSet . exampleSpectrum . getBrukerBAFAllMetadata . getBrukerBAFMetadata . getBrukerBAFSample . getBrukerBAFSpectrum . getBrukerMCFAllMetadata . getBrukerMCFIntensities . getBrukerMCFMetadata . getBrukerMCFSample . getBrukerMCFSampleSet . getBrukerMCFSpectrum . getBrukerMCFSpots . getSample . getSampleFromSpectrum . getSampleSet . getSpectrum . measureSample . measureSampleSet . newBrukerBAFReader . newBrukerMCFReader . plotRtmsSample . plotRtmsSampleSet . plotRtmsSpectrum . reopen . rtmsPeak . rtmsPeakList . rtmsSpectrum . sampleAndSampleSet .
Some associated R codes: data.R . rtmsBrukerBAFReader.R . rtmsBrukerMCFReader.R . rtmsMeasurement.R . rtmsPeak.R . rtmsPlotting.R . rtmsSample.R . rtmsSpectrum.R . Full rtms package functions and examples
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