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rtemis.a3  

Amino Acid Annotation (A3) Format
View on CRAN: Click here


Download and install rtemis.a3 package within the R console
Install from CRAN:
install.packages("rtemis.a3")

Install from Github:
library("remotes")
install_github("cran/rtemis.a3")

Install by package version:
library("remotes")
install_version("rtemis.a3", "0.5.3")



Attach the package and use:
library("rtemis.a3")
Maintained by
E.D. Gennatas
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-04-28
Latest Update: 2026-04-28
Description:
Implements the Amino Acid Annotation (A3) format using 'S7' classes. The A3 format is a structured schema for annotating amino acid sequences with site, region, post-translational modification (PTM), processing event, and variant information. Provides functions to create, read, and write A3 objects, and to import annotations from 'UniProt', 'AlphaFold', 'PDBe', 'ClinVar', and 'Ensembl'.
How to cite:
E.D. Gennatas (2026). rtemis.a3: Amino Acid Annotation (A3) Format. R package version 0.5.3, https://cran.r-project.org/web/packages/rtemis.a3. Accessed 04 Jun. 2026.
Previous versions and publish date:
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