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rrBLUP  

Ridge Regression and Other Kernels for Genomic Selection
View on CRAN: Click here


Download and install rrBLUP package within the R console
Install from CRAN:
install.packages("rrBLUP")

Install from Github:
library("remotes")
install_github("cran/rrBLUP")

Install by package version:
library("remotes")
install_version("rrBLUP", "4.6.3")



Attach the package and use:
library("rrBLUP")
Maintained by
Jeffrey Endelman
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2011-05-08
Latest Update: 2023-12-10
Description:
Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, <doi:10.3835/plantgenome2011.08.0024>). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.
How to cite:
Jeffrey Endelman (2011). rrBLUP: Ridge Regression and Other Kernels for Genomic Selection. R package version 4.6.3, https://cran.r-project.org/web/packages/rrBLUP
Previous versions and publish date:
1.0 (2011-05-08 08:23), 1.1 (2011-05-20 14:05), 1.2 (2011-08-17 22:27), 1.6 (2011-09-21 15:18), 1.7 (2011-09-23 17:01), 1.8 (2011-09-29 13:28), 2.0 (2011-10-14 17:44), 2.1 (2011-11-02 18:26), 2.2 (2011-11-05 11:48), 2.3 (2011-11-10 13:59), 2.5 (2011-11-23 17:04), 2.7 (2011-12-02 17:23), 2.8 (2011-12-17 16:25), 3.0 (2012-01-04 08:31), 3.1 (2012-01-05 02:33), 3.2 (2012-01-25 00:06), 3.3 (2012-02-01 09:13), 3.4 (2012-02-06 22:06), 3.5 (2012-02-14 08:21), 3.6 (2012-04-03 23:02), 3.7 (2012-04-10 06:27), 3.8 (2012-05-17 08:31), 4.0 (2012-09-18 20:50), 4.1 (2012-12-21 18:03), 4.2 (2013-06-18 18:22), 4.3 (2014-03-06 08:05), 4.4 (2015-10-28 18:39), 4.5 (2017-06-13 01:08), 4.6.1 (2019-12-18 18:40), 4.6.2 (2023-01-06 19:50), 4.6 (2018-01-28 23:33)
Other packages that cited rrBLUP R package
View rrBLUP citation profile
Other R packages that rrBLUP depends, imports, suggests or enhances
Functions, R codes and Examples using the rrBLUP R package
Some associated functions: A.mat . GWAS . kin.blup . kinship.BLUP . mixed.solve . rrBLUP-package . 
Some associated R codes: A.mat.R . GWAS.R . kin.blup.R . kinship.BLUP.R . mixed.solve.R .  Full rrBLUP package functions and examples
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Maintainer: Jun Li (view profile)

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