Other packages > Find by keyword >

rphylo  

Phylogenetic Analysis with Dependent Discrete Models
View on CRAN: Click here


Download and install rphylo package within the R console
Install from CRAN:
install.packages("rphylo")

Install from Github:
library("remotes")
install_github("cran/rphylo")

Install by package version:
library("remotes")
install_version("rphylo", "0.1.1")



Attach the package and use:
library("rphylo")
Maintained by
Vivian G. Li
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-06-23
Latest Update: 2026-06-23
Description:
Implementation of dependent discrete models (with reversible jump MCMC) derived from 'BayesTraits' V5.0.3 <https://github.com/AndrewPMeade/BayesTraits-Release/tree/Release>. Original software copyright Andrew Meade and contributors, distributed under GPL-3. Modifications for this package by Vivian G. Li <liguo.vivian@gmail.com>. The following articles should be referenced when using this package: Pagel, M., A. Meade and D. Barker (2004) "Bayesian estimation of ancestral character states on phylogenies" <doi:10.1080/10635150490522232>; Pagel, M. (1994) "Detecting correlated evolution on phylogenies: a general method for the comparative analysis of discrete characters" <doi:10.1098/rspb.1994.0006>; Pagel, M. and A. Meade (2006) "Bayesian analysis of correlated evolution of discrete characters by reversible-jump Markov chain Monte Carlo" <doi:10.1086/503444>.
How to cite:
Vivian G. Li (2026). rphylo: Phylogenetic Analysis with Dependent Discrete Models. R package version 0.1.1, https://cran.r-project.org/web/packages/rphylo. Accessed 24 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited rphylo R package
View rphylo citation profile
Other R packages that rphylo depends, imports, suggests or enhances
Complete documentation for rphylo
Functions, R codes and Examples using the rphylo R package
Full rphylo package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

climwin  
Climate Window Analysis
Contains functions to detect and visualise periods of climate sensitivity (climate windows) for a g ...
Download / Learn more Package Citations See dependency  
forecastHybrid  
Convenient Functions for Ensemble Time Series Forecasts
Convenient functions for ensemble forecasts in R combining approaches from the 'forecast' package. ...
Download / Learn more Package Citations See dependency  
gemlog  
File Conversion for "Gem Infrasound Logger"
Reads data files from the 'Gem infrasound logger' for analysis and converts to segy format (which is ...
Download / Learn more Package Citations See dependency  
givitiR  
The GiViTI Calibration Test and Belt
Functions to assess the calibration of logistic regression models with the GiViTI (Gruppo Italiano p ...
Download / Learn more Package Citations See dependency  
magicfor  
Magic Functions to Obtain Results from for Loops
Magic functions to obtain results from for loops. ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

29,080

R Packages

247,686

Dependencies

77,281

Author Associations

29,081

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA