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ribd
View on CRAN: Click
here
Download and install ribd package within the R console
Install from CRAN:
install.packages("ribd")
Install from Github:
library("remotes")
install_github("cran/ribd")
Install by package version:
library("remotes")
install_version("ribd", "1.7.0")
Attach the package and use:
library("ribd")
Maintained by
Magnus Dehli Vigeland
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-11-01
Latest Update: 2023-08-10
Description:
Recursive algorithms for computing various relatedness
coefficients, including pairwise kinship, kappa and identity
coefficients. Both autosomal and X-linked coefficients are computed.
Founders are allowed to be inbred, which enables construction of any
given kappa coefficients, as described in Vigeland (2020)
. In addition to the standard
coefficients, 'ribd' also computes a range of lesser-known
coefficients, including generalised kinship coefficients, multi-person
coefficients and two-locus coefficients (Vigeland, 2023,
). Many features of 'ribd' are
available through the online app 'QuickPed' at
; see Vigeland (2022)
.
How to cite:
Magnus Dehli Vigeland (2019). ribd: Pedigree-based Relatedness Coefficients. R package version 1.7.0, https://cran.r-project.org/web/packages/ribd. Accessed 21 Nov. 2024.
Previous versions and publish date:
Other packages that cited ribd R package
View ribd citation profile
Other R packages that ribd depends,
imports, suggests or enhances
Complete documentation for ribd
Functions, R codes and Examples using
the ribd R package
Some associated functions: ELR . coeffTable . condensedIdentity . condensedIdentityX . constructPedigree . external_coefs . gKinship . ibdDraw . ibdTriangle . identityCoefs . inbreeding . jicaque . kappaIBD . kin2deg . kinship . minimalPattern . multiPersonIBD . realisedIbdVariance . ribd-package . showInTriangle . twoLocusIBD . twoLocusIdentity . twoLocusInbreeding . twoLocusKinship . twoLocusPlot .
Some associated R codes: ELR.R . coeffTable.R . condensedIdentity.R . constructPedigree.R . data.R . external_relatedness.R . gKinship.R . gip.R . ibdDraw.R . ibdTriangle.R . identityCoefs.R . identity_GC.R . identity_Karigl.R . identity_LS.R . identity_WL.R . identity_idcoefs.R . inbreeding.R . kappaIbd.R . kinship.R . multiPersonIBD.R . realisedIbdVariance.R . ribd-package.R . twoLocusGeneralisedKinship.R . twoLocusGeneralisedKinship_boundary.R . twoLocusIBD.R . twoLocusIdentity.R . twoLocusInbreeding.R . twoLocusKinship.R . twoLocusPlot.R . twoLocus_utils.R . utils.R . Full ribd package functions and examples
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