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ribd  

Pedigree-based Relatedness Coefficients
View on CRAN: Click here


Download and install ribd package within the R console
Install from CRAN:
install.packages("ribd")

Install from Github:
library("remotes")
install_github("cran/ribd")

Install by package version:
library("remotes")
install_version("ribd", "1.7.0")



Attach the package and use:
library("ribd")
Maintained by
Magnus Dehli Vigeland
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-11-01
Latest Update: 2023-08-10
Description:
Recursive algorithms for computing various relatedness coefficients, including pairwise kinship, kappa and identity coefficients. Both autosomal and X-linked coefficients are computed. Founders are allowed to be inbred, which enables construction of any given kappa coefficients, as described in Vigeland (2020) <doi:10.1007/s00285-020-01505-x>. In addition to the standard coefficients, 'ribd' also computes a range of lesser-known coefficients, including generalised kinship coefficients, multi-person coefficients and two-locus coefficients (Vigeland, 2023, <doi:10.1093/g3journal/jkac326>). Many features of 'ribd' are available through the online app 'QuickPed' at <https://magnusdv.shinyapps.io/quickped>; see Vigeland (2022) <doi:10.1186/s12859-022-04759-y>.
How to cite:
Magnus Dehli Vigeland (2019). ribd: Pedigree-based Relatedness Coefficients. R package version 1.7.0, https://cran.r-project.org/web/packages/ribd
Previous versions and publish date:
1.0.0 (2019-11-01 13:10), 1.0.1 (2020-02-03 16:10), 1.1.0 (2020-06-19 11:00), 1.2.0 (2020-08-02 05:10), 1.3.0 (2021-05-28 19:00), 1.3.1 (2021-11-26 17:11), 1.4.0 (2022-04-17 01:40), 1.5.0 (2022-09-14 10:30), 1.6.1 (2023-08-10 15:00)
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