Other packages > Find by keyword >

revert  

Reversion Mutation Detector for DNA Sequencing Data
View on CRAN: Click here


Download and install revert package within the R console
Install from CRAN:
install.packages("revert")

Install from Github:
library("remotes")
install_github("cran/revert")

Install by package version:
library("remotes")
install_version("revert", "1.0.0")



Attach the package and use:
library("revert")
Maintained by
Hui Xiao
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-11-23
Latest Update: 2023-11-23
Description:
A tool for detecting reversions for a given pathogenic mutation from next-generation DNA sequencing data. It analyses reads aligned to the locus of the pathogenic mutation and reports reversion events where secondary mutations have restored or undone the deleterious effect of the original pathogenic mutation, e.g., secondary indels complement to a frameshift pathogenic mutation converting the orignal frameshift mutation into inframe mutaions, deletions or SNVs that replaced the original pathogenic mutation restoring the open reading frame, SNVs changing the stop codon caused by the original nonsense SNV into an amino acid, etc.
How to cite:
Hui Xiao (2023). revert: Reversion Mutation Detector for DNA Sequencing Data. R package version 1.0.0, https://cran.r-project.org/web/packages/revert. Accessed 05 Oct. 2026.
Previous versions and publish date:
(2026-07-09 06:50), 0.0.1 (2023-11-23 17:20)
Other packages that cited revert R package
View revert citation profile
Other R packages that revert depends, imports, suggests or enhances
Complete documentation for revert
Functions, R codes and Examples using the revert R package
Some associated functions: getReversions . 
Some associated R codes: getReversions.R . helpers.R .  Full revert package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

genie  
Fast, Robust, and Outlier Resistant Hierarchical Clustering
Includes the reference implementation of Genie - a hierarchical clustering algorithm that links two ...
Download / Learn more Package Citations See dependency  
correlation  
Methods for Correlation Analysis
Lightweight package for computing different kinds of correlations, such as partial correlations, Ba ...
Download / Learn more Package Citations See dependency  
cdlTools  
Tools to Download and Work with USDA Cropscape Data
Downloads USDA National Agricultural Statistics Service (NASS) cropscape data for a specified state ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

28,905

R Packages

247,686

Dependencies

76,495

Author Associations

28,906

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA