Other packages > Find by keyword >

rbcmodel  

Model Rubisco Carboxylation Rate Across Temperature, CO2, and O2
View on CRAN: Click here


Download and install rbcmodel package within the R console
Install from CRAN:
install.packages("rbcmodel")

Install from Github:
library("remotes")
install_github("cran/rbcmodel")

Install by package version:
library("remotes")
install_version("rbcmodel", "1.0.1")



Attach the package and use:
library("rbcmodel")
Maintained by
Kaitlin Harrison
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-08-04
Latest Update: 2026-08-04
Description:
Collects published kinetics of ribulose 1,5-bisphosphate carboxylase/oxygenase (Rubisco) and uses these kinetics to model the carboxylation rate across CO2 and O2 concentrations and different temperatures. The carboxylation rate can be modeled as the gross rate or the net rate, which takes into account the oxygenase activity of the enzyme using one of the three known phosphoglycolate salvage pathways. Custom enzymes and temperature dependences can be created with user kinetics, or published kinetics can be accessed through a meta-analysis contained within the package. An expansion of methods from Harrison et al. (2025) <doi:10.1128/aem.00604-25>.
How to cite:
Kaitlin Harrison (2026). rbcmodel: Model Rubisco Carboxylation Rate Across Temperature, CO2, and O2. R package version 1.0.1, https://cran.r-project.org/web/packages/rbcmodel. Accessed 28 Oct. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited rbcmodel R package
View rbcmodel citation profile
Other R packages that rbcmodel depends, imports, suggests or enhances
Complete documentation for rbcmodel
Functions, R codes and Examples using the rbcmodel R package
Full rbcmodel package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

cats  
Cohort Platform Trial Simulation
Cohort plAtform Trial Simulation whereby every cohort consists of two arms, control and experimenta ...
Download / Learn more Package Citations See dependency  
ncdf4  
Interface to Unidata netCDF (Version 4 or Earlier) Format Data Files
Provides a high-level R interface to data files written using Unidata's netCDF library (version 4 or ...
Download / Learn more Package Citations See dependency  
NPHazardRate  
Nonparametric Hazard Rate Estimation
Provides functions and examples for histogram, kernel (classical, variable bandwidth and transformat ...
Download / Learn more Package Citations See dependency  
msamp  
Estimate Sample Size to Detect Bacterial Contamination in a Product Lot
Estimates the sample size needed to detect microbial contamination in a lot with a user-specified d ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

29,218

R Packages

247,686

Dependencies

77,281

Author Associations

29,219

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA