Other packages > Find by keyword >

randomGODB  

Random GO Database
View on CRAN: Click here


Download and install randomGODB package within the R console
Install from CRAN:
install.packages("randomGODB")

Install from Github:
library("remotes")
install_github("cran/randomGODB")

Install by package version:
library("remotes")
install_version("randomGODB", "1.1")



Attach the package and use:
library("randomGODB")
Maintained by
Barry Zeeberg
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-05-07
Latest Update: 2025-05-07
Description:
The Gene Ontology (GO) Consortium <https://geneontology.org/> organizes genes into hierarchical categories based on biological process (BP), molecular function (MF) and cellular component (CC, i.e., subcellular localization). Tools such as 'GoMiner' (see Zeeberg, B.R., Feng, W., Wang, G. et al. (2003) <doi:10.1186/gb-2003-4-4-r28>) can leverage GO to perform ontological analysis of microarray and proteomics studies, typically generating a list of significant functional categories. The significance is traditionally determined by randomizing the input gene list to computing the false discovery rate (FDR) of the enrichment p-value for each category. We explore here the novel alternative of randomizing the GO database rather than the gene list.
How to cite:
Barry Zeeberg (2025). randomGODB: Random GO Database. R package version 1.1, https://cran.r-project.org/web/packages/randomGODB. Accessed 29 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:48), 1.0 (2025-05-07 14:10)
Other packages that cited randomGODB R package
View randomGODB citation profile
Other R packages that randomGODB depends, imports, suggests or enhances
Complete documentation for randomGODB
Functions, R codes and Examples using the randomGODB R package
Full randomGODB package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

WaveletSVR  
Wavelet-SVR Hybrid Model for Time Series Forecasting
The main aim of this package is to combine the advantage of wavelet and support vector machine model ...
Download / Learn more Package Citations See dependency  
DMwR2  
Functions and Data for the Second Edition of "Data Mining with R"
Functions and data accompanying the second edition of the book "Data Mining with R, learning with c ...
Download / Learn more Package Citations See dependency  
RadData  
Nuclear Decay Data for Dosimetric Calculations - ICRP 107
Nuclear Decay Data for Dosimetric Calculations from the International Commission on Radiological Pr ...
Download / Learn more Package Citations See dependency  
rebus.datetimes  
Date and Time Extensions for the 'rebus' Package
Build regular expressions piece by piece using human readable code. This package contains date and ...
Download / Learn more Package Citations See dependency  
rbacon  
Age-Depth Modelling using Bayesian Statistics
An approach to age-depth modelling that uses Bayesian statistics to reconstruct accumulation histori ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  

27,987

R Packages

239,283

Dependencies

74,234

Author Associations

27,988

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA