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rabhit  

Inference Tool for Antibody Haplotype
View on CRAN: Click here


Download and install rabhit package within the R console
Install from CRAN:
install.packages("rabhit")

Install from Github:
library("remotes")
install_github("cran/rabhit")

Install by package version:
library("remotes")
install_version("rabhit", "0.2.5")



Attach the package and use:
library("rabhit")
Maintained by
Ayelet Peres
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-04-09
Latest Update: 2023-02-06
Description:
Infers V-D-J haplotypes and gene deletions from AIRR-seq data for Ig and TR chains, based on J, D, or V genes as anchor, by adapting a Bayesian framework. It also calculates a Bayes factor, a number that indicates the certainty level of the inference, for each haplotyped gene. Citation: Gidoni, et al (2019) . Peres and Gidoni, et al (2019) .
How to cite:
Ayelet Peres (2019). rabhit: Inference Tool for Antibody Haplotype. R package version 0.2.5, https://cran.r-project.org/web/packages/rabhit. Accessed 11 Apr. 2025.
Previous versions and publish date:
0.1.0.0 (2019-04-09 18:13), 0.1.1 (2019-05-08 15:10), 0.1.4 (2020-01-29 21:20), 0.1.5 (2020-07-12 00:40), 0.2.0 (2021-12-06 09:50), 0.2.1 (2022-02-16 15:10), 0.2.4 (2022-09-22 17:10), 0.2.5 (2023-02-06 14:32)
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