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rOCEAN  

Two-Way Feature Set Testing for Multi-Omics
View on CRAN: Click here


Download and install rOCEAN package within the R console
Install from CRAN:
install.packages("rOCEAN")

Install from Github:
library("remotes")
install_github("cran/rOCEAN")

Install by package version:
library("remotes")
install_version("rOCEAN", "1.0")



Attach the package and use:
library("rOCEAN")
Maintained by
Mitra Ebrahimpoor
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-12
Latest Update: 2024-11-12
Description:
For any two way feature-set from a pair of pre-processed omics data, 3 different true discovery proportions (TDP), namely pairwise-TDP, column-TDP and row-TDP are calculated. Due to embedded closed testing procedure, the choice of feature-sets can be changed infinite times and even after seeing the data without any change in type I error rate. For more details refer to Ebrahimpoor et al., (2024) <doi:10.48550/arXiv.2410.19523>.
How to cite:
Mitra Ebrahimpoor (2024). rOCEAN: Two-Way Feature Set Testing for Multi-Omics. R package version 1.0, https://cran.r-project.org/web/packages/rOCEAN. Accessed 25 Oct. 2026.
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Complete documentation for rOCEAN
Functions, R codes and Examples using the rOCEAN R package
Full rOCEAN package functions and examples
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