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quincunx  

REST API Client for the 'PGS' Catalog
View on CRAN: Click here


Download and install quincunx package within the R console
Install from CRAN:
install.packages("quincunx")

Install from Github:
library("remotes")
install_github("cran/quincunx")

Install by package version:
library("remotes")
install_version("quincunx", "0.1.9")



Attach the package and use:
library("quincunx")
Maintained by
Ramiro Magno
[Scholar Profile | Author Map]
First Published: 2021-10-08
Latest Update: 2023-07-04
Description:
Programmatic access to the 'PGS' Catalog. This package provides easy access to 'PGS' Catalog data by accessing the REST API .
How to cite:
Ramiro Magno (2021). quincunx: REST API Client for the 'PGS' Catalog. R package version 0.1.9, https://cran.r-project.org/web/packages/quincunx. Accessed 14 May. 2025.
Previous versions and publish date:
0.1.1 (2021-10-08 09:10), 0.1.2 (2021-10-30 00:00), 0.1.4 (2021-10-30 15:50), 0.1.5 (2022-08-14 18:50), 0.1.7 (2023-07-04 18:20)
Other packages that cited quincunx R package
View quincunx citation profile
Other R packages that quincunx depends, imports, suggests or enhances
Complete documentation for quincunx
Functions, R codes and Examples using the quincunx R package
Some associated functions: ancestry_categories . bind . clear_cache . cohorts-class . cohorts . collect_pgs_ids . collect_samples . contains_question_mark . count . filter_by_id . first_non_na . get_ancestry_categories . get_ancestry_symbol_mappings . get_cohorts . get_performance_metrics . get_publications . get_releases . get_sample_sets . get_scores . get_trait_categories . get_traits . is_paginated . is_pgs_id . is_pubmed_id . list_to_s4 . msg_400 . msg_404 . msg_empty . n . n_pages . no_msg . nr_to_na . offsets . open_in_dbsnp . open_in_pgs_catalog . open_in_pubmed . performance_metrics-class . performance_metrics . pgp_to_pgs . pgp_to_ppm . pgp_to_pss . pgs_server . pgs_to_pgp . pgs_to_ppm . pgs_to_pss . pgs_to_study . pipe . ppm_to_pgp . ppm_to_pgs . ppm_to_pss . pss_to_pgp . pss_to_pgs . pss_to_ppm . publications-class . publications . read_scoring_file . releases-class . releases . remap_id . request . request_all . request_warning . s4_to_list . sample_sets-class . sample_sets . scores-class . scores . setop . stages . study_to_pgs . subset-cohorts . subset-performance_metrics . subset-publications . subset-releases . subset-sample_sets . subset-scores . subset-trait_categories . subset-traits . sure . trait_categories-class . trait_categories . traits-class . traits . user_agent_id . write_xlsx . 
Some associated R codes: ancestry_categories.R . class-cohorts.R . class-performance_metrics.R . class-publications.R . class-releases.R . class-sample_sets.R . class-scores.R . class-trait_categories.R . class-traits.R . clear_cache.R . contains_question_mark.R . count.R . drop_metadata_cols.R . first_non_na.R . generics.R . get.R . get_ancestry_categories.R . get_cohorts.R . get_column.R . get_performance_metrics.R . get_publications.R . get_releases.R . get_sample_sets.R . get_scores.R . get_trait_categories.R . get_traits.R . id_mapping.R . is_json_empty.R . is_paginated.R . is_pgs_id.R . is_pubmed_id.R . messages.R . n_pages.R . nr_to_na.R . offsets.R . open_in_dbsnp.R . open_in_pgs_catalog.R . open_in_pubmed.R . parse-ancestry_categories.R . parse-cohorts.R . parse-performance_metrics.R . parse-publications.R . parse-releases.R . parse-sample_sets.R . parse-scores.R . parse-trait_categories.R . parse-traits.R . read_file_column_names.R . read_pgs_scoring_file.R . relocate_metadata_cols.R . remap_id.R . request.R . s4-utils.R . stages.R . sure.R . unwrap_cohort.R . unwrap_demographics.R . unwrap_efotrait.R . unwrap_interval.R . unwrap_publication.R . unwrap_sample.R . utils-pipe.R . warnings.R . write_xlsx.R .  Full quincunx package functions and examples
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