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quicR  

RT-QuIC Data Formatting and Analysis
View on CRAN: Click here


Download and install quicR package within the R console
Install from CRAN:
install.packages("quicR")

Install from Github:
library("remotes")
install_github("cran/quicR")

Install by package version:
library("remotes")
install_version("quicR", "2.1.0")



Attach the package and use:
library("quicR")
Maintained by
Gage Rowden
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-11-15
Latest Update: 2025-02-26
Description:
Designed for the curation and analysis of data generated from real-time quaking-induced conversion (RT-QuIC) assays first described by Atarashi et al. (2011) <doi:10.1038/nm.2294>. 'quicR' calculates useful metrics such as maxpoint ratio: Rowden et al. (2023) <doi:10.1099/vir.0.069906-0>; time-to-threshold: Shi et al. (2013) <doi:10.1186/2051-5960-1-44>; and maximum slope. Integration with the output from plate readers allows for seamless input of raw data into the R environment.
How to cite:
Gage Rowden (2024). quicR: RT-QuIC Data Formatting and Analysis. R package version 2.1.0, https://cran.r-project.org/web/packages/quicR. Accessed 05 Jun. 2026.
Previous versions and publish date:
1.0.2 (2024-11-15 10:00), 2.1.0 (2025-02-26 20:30)
Other packages that cited quicR R package
View quicR citation profile
Other R packages that quicR depends, imports, suggests or enhances
Complete documentation for quicR
Functions, R codes and Examples using the quicR R package
Full quicR package functions and examples
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