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qtl2pattern
View on CRAN: Click
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Download and install qtl2pattern package within the R console
Install from CRAN:
install.packages("qtl2pattern")
Install from Github:
library("remotes")
install_github("cran/qtl2pattern")
Install by package version:
library("remotes")
install_version("qtl2pattern", "1.2.1")
Attach the package and use:
library("qtl2pattern")
Maintained by
Brian S Yandell
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[Scholar Profile | Author Map]
All associated links for this package
https://github.com/byandell/qtl2pattern . 10.32614/CRAN.package.qtl2pattern . https://github.com/byandell/qtl2pattern . qtl2pattern results . qtl2pattern.pdf . demo qtl2pattern features . qtl2pattern_1.2.1.tar.gz . qtl2pattern_1.2.1.zip . qtl2pattern_1.2.1.zip . qtl2pattern_1.2.1.zip . qtl2pattern_1.2.1.tgz . qtl2pattern_1.2.1.tgz . qtl2pattern_1.2.1.tgz . qtl2pattern_1.2.1.tgz . qtl2pattern archive . https://CRAN.R-project.org/package=qtl2pattern .
First Published: 2021-09-22
Latest Update: 2023-03-11
Description:
Routines in 'qtl2' to study allele patterns in quantitative trait loci (QTL)
mapping over a chromosome.
Useful in crosses with more than two alleles to identify how sets of alleles,
genetically different strands at the same locus, have different response levels.
Plots show profiles over a chromosome.
Can handle multiple traits together.
See .
How to cite:
Brian S Yandell (2021). qtl2pattern: Pattern Support for 'qtl2' Package. R package version 1.2.1, https://cran.r-project.org/web/packages/qtl2pattern. Accessed 29 Apr. 2025.
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Complete documentation for qtl2pattern
Functions, R codes and Examples using
the qtl2pattern R package
Some associated functions: allele1 . create_probs_query_func . feature_snp . feature_tbl . gene_exon . gene_snp . genoprob_to_patternprob . get.gene.locations . get_feature_snp . get_gene_snp . merge_feature . pattern_diplos . pattern_label . read_fast . read_probs . scan1pattern . sdp_to_pattern . snpinfo_to_map . snpprob_collapse . top_snps_pattern .
Some associated R codes: allele1.R . convert_probs.R . create_probs_query_func.R . feature_snp.R . feature_tbl.R . gene_exon.R . gene_snp.R . genoprob_to_patternprob.R . ggplot_allele1.R . ggplot_feature_tbl.R . ggplot_gene_exon.R . ggplot_merge_feature.R . ggplot_scan1pattern.R . merge_feature.R . modify_aprobs.R . modify_object.R . nqrank.R . pattern_diplos.R . pattern_label.R . read_fast.R . read_probs.R . read_probs_calc.R . read_probs_fast.R . scan1pattern.R . sdp_to_pattern.R . snpinfo_to_haplos.R . snpinfo_to_map.R . snpprob_collapse.R . top_snps_pattern.R . Full qtl2pattern package functions and examples
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