R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
qtl
Tools for Analyzing QTL Experiments
View on CRAN: Click
here
Download and install qtl package within the R console
Install from CRAN:
install.packages("qtl")
Install from Github:
library("remotes")
install_github("cran/qtl") Install by package version:
library("remotes")
install_version("qtl", "1.74") Attach the package and use:
library("qtl")
Maintained by
Karl W Broman
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2001-10-30
Latest Update: 2024-08-22
Description:
Analysis of experimental crosses to identify genes
(called quantitative trait loci, QTLs) contributing to variation in
quantitative traits.
Broman et al. (2003) .
How to cite:
Karl W Broman (2001). qtl: Tools for Analyzing QTL Experiments. R package version 1.74, https://cran.r-project.org/web/packages/qtl. Accessed 18 Sep. 2026.
Previous versions and publish date:
(2026-07-09 06:45), 0.85-4 (2001-10-30 12:12), 0.92-3 (2002-02-12 20:57), 0.96-5 (2002-09-30 23:04), 0.97-21 (2003-06-21 00:21), 0.97-22 (2004-01-02 16:22), 0.98-57 (2004-09-12 10:03), 0.99-22 (2005-04-26 11:08), 0.99-24 (2005-04-27 10:32), 1.00-15 (2005-09-03 21:44), 1.00-16 (2005-09-04 14:25), 1.00-17 (2005-09-07 17:27), 1.01-9 (2005-10-25 22:28), 1.02-26 (2006-06-08 12:52), 1.03-14 (2006-07-21 10:26), 1.04-52 (2006-10-28 12:42), 1.04-53 (2006-10-29 10:40), 1.05-2 (2006-11-09 11:13), 1.06-43 (2007-08-09 15:01), 1.07-11 (2007-09-21 17:22), 1.07-12 (2007-10-09 22:12), 1.08-55 (2008-04-03 18:28), 1.08-56 (2008-04-09 09:14), 1.09-43 (2008-07-20 11:09), 1.10-27 (2009-01-11 22:26), 1.11-12 (2009-03-29 16:55), 1.12-26 (2009-07-01 14:04), 1.13-7 (2009-09-10 22:15), 1.14-2 (2009-10-01 21:55), 1.15-15 (2010-05-02 19:26), 1.16-4 (2010-05-16 18:20), 1.16-6 (2010-05-25 17:58), 1.17-39 (2010-07-29 11:14), 1.18-7 (2010-08-18 20:21), 1.19-20 (2010-11-30 09:05), 1.20-15 (2011-02-23 10:33), 1.21-2 (2011-03-21 16:34), 1.22-21 (2011-11-29 07:57), 1.23-16 (2012-03-06 20:04), 1.24-9 (2012-05-25 19:13), 1.25-15 (2012-08-14 08:57), 1.26-13 (2012-11-27 15:03), 1.26-14 (2012-11-27 21:25), 1.27-10 (2013-04-11 16:56), 1.28-19 (2013-09-23 23:09), 1.29-2 (2013-12-09 17:08), 1.30-4 (2014-02-11 00:55), 1.31-9 (2014-03-20 07:39), 1.32-10 (2014-05-29 18:40), 1.33-7 (2014-08-12 20:20), 1.34-16 (2014-10-29 19:20), 1.34-17 (2014-10-30 21:22), 1.35-1 (2014-12-13 00:20), 1.35-3 (2014-12-16 04:26), 1.36-6 (2015-03-06 00:47), 1.37-11 (2015-08-25 19:21), 1.38-4 (2015-12-03 16:24), 1.39-5 (2016-03-04 17:34), 1.40-8 (2016-11-05 08:59), 1.41-6 (2017-06-12 08:01), 1.42-7 (2018-02-18 16:31), 1.42-8 (2018-02-19 20:40), 1.44-9 (2019-01-22 18:30), 1.45-11 (2020-02-02 17:40), 1.46-2 (2020-03-12 00:10), 1.47-9 (2021-01-07 22:30), 1.48-1 (2021-03-27 09:40), 1.50 (2021-10-06 18:00), 1.52 (2022-07-09 16:50), 1.54 (2022-12-02 01:20), 1.58 (2023-01-07 19:50), 1.60 (2023-04-18 22:40), 1.62 (2023-11-17 22:00), 1.66 (2023-11-27 21:40), 1.70 (2024-08-22 04:20), 1.72 (2025-11-19 16:50)
Other packages that cited qtl R package
View qtl citation profile
Other R packages that qtl depends,
imports, suggests or enhances
Complete documentation for qtl
Functions, R codes and Examples using
the qtl R package
Some associated functions: MQM . a.starting.point . add.cim.covar . add.threshold . addcovarint . addint . addloctocross . addmarker . addpair . addqtl . addtoqtl . allchrsplits . argmax.geno . arithscan . arithscanperm . badorder . bayesint . bristle3 . bristleX . c.cross . c.scanone . c.scanoneperm . c.scantwo . c.scantwoperm . calc.errorlod . calc.genoprob . calc.penalties . cbind.scanoneperm . cbind.scantwoperm . checkAlleles . chrlen . chrnames . cim . clean.cross . clean.scantwo . cleanGeno . comparecrosses . comparegeno . compareorder . condense.scantwo . convert.map . convert.scanone . convert.scantwo . convert2riself . convert2risib . convert2sa . countXO . drop.dupmarkers . drop.markers . drop.nullmarkers . dropfromqtl . droponemarker . effectplot . effectscan . est.map . est.rf . fake.4way . fake.bc . fake.f2 . fill.geno . find.flanking . find.marker . find.markerpos . find.pheno . find.pseudomarker . findDupMarkers . find_large_intervals . findmarkerindex . fitqtl . fitstahl . flip.order . formLinkageGroups . formMarkerCovar . geno.crosstab . geno.image . geno.table . getid . groupclusteredheatmap . hyper . inferFounderHap . inferredpartitions . interpPositions . jittermap . listeria . locateXO . locations . lodint . makeqtl . map10 . map2table . mapthis . markerlrt . markernames . max.scanPhyloQTL . max.scanone . max.scantwo . movemarker . mqmaugment . mqmautocofactors . mqmextractmarkers . mqmfind.marker . mqmgetmodel . mqmpermutation . mqmplotcircle . mqmplotcistrans . mqmplotclusteredheatmap . mqmplotcofactors . mqmplotdirectedqtl . mqmplotheatmap . mqmplotmultitrait . mqmplotpermutations . mqmplotsingletrait . mqmprocesspermutation . mqmscan . mqmscanall . mqmscanfdr . mqmsetcofactors . mqmtestnormal . multitrait . nchr . nind . nmar . nmissing . nphe . nqrank . nqtl . ntyped . nullmarkers . orderMarkers . phenames . pickMarkerSubset . plot.comparegeno . plot.cross . plot.errorlod . plot.geno . plot.info . plot.map . plot.missing . plot.pheno . plot.pxg . plot.qtl . plot.rf . plot.rfmatrix . plot.scanPhyloQTL . plot.scanone . plot.scanoneboot . plot.scanoneperm . plot.scantwo . plot.scantwoperm . plotLodProfile . plotModel . pull.argmaxgeno . pull.draws . pull.geno . pull.genoprob . pull.map . pull.markers . pull.pheno . pull.rf . qtl-internal . qtlversion . read.cross . readMWril . reduce2grid . refineqtl . reorderqtl . replace.map . replacemap.scanone . replacemap.scantwo . replaceqtl . rescalemap . ripple . scanPhyloQTL . scanone . scanoneboot . scanonevar.meanperm . scanonevar . scanonevar.varperm . scanqtl . scantwo . scantwopermhk . shiftmap . sim.cross . sim.geno . sim.map . simFounderSnps . simPhyloQTL . simulateMissingData . stepwiseqtl . strip.partials . subset.cross . subset.map . subset.scanone . subset.scanoneperm . subset.scantwo . subset.scantwoperm . summary.comparegeno . summary.cross . summary.fitqtl . summary.map . summary.qtl . summary.ripple . summary.scanPhyloQTL . summary.scanone . summary.scanoneboot . summary.scanoneperm . summary.scantwo . summary.scantwo.old . summary.scantwoperm . switch.order . switchAlleles . table2map . top.errorlod . totmar . transformPheno . tryallpositions . typingGap . write.cross . xaxisloc.scanone .
Some associated R codes: add.cim.covar.R . add_threshold.R . addmarker.R . addqtl.R . argmax.geno.R . arithscan.R . bcsft.R . calc.genoprob.R . calc.pairprob.R . cim.R . comparegeno.R . compareorder.R . countXO.R . discan.R . droponemarker.R . effectplot.R . effectscan.R . errorlod.R . est.map.R . est.rf.R . find_large_intervals.R . fitqtl.R . fitstahl.R . inferFounderHap.R . interpPositions.R . makeqtl.R . map_construction.R . markerlrt.R . mqmaugment.R . mqmcircleplot.R . mqmcofactors.R . mqmpermutation.R . mqmplots.R . mqmprepare.R . mqmscan.R . mqmscanall.R . mqmsnow.R . mqmutil.R . phyloqtl_scan.R . phyloqtl_sim.R . phyloqtl_util.R . pickMarkerSubset.R . plot.R . plot.scanone.R . plot.scantwo.R . plotModel.R . plotperm.R . pull_stuff.R . qtlcart_io.R . read.cross.R . read.cross.csv.R . read.cross.csvs.R . read.cross.gary.R . read.cross.karl.R . read.cross.mm.R . read.cross.mq.R . read.cross.qtx.R . read.cross.tidy.R . readMWril.R . refineqtl.R . replacemap.R . ril48_reorg.R . ripple.R . scanone.R . scanoneboot.R . scanonevar.R . scanonevar.meanperm.R . scanonevar.varperm.R . scanqtl.R . scantwo.R . scantwopermhk.R . sim.geno.R . sim_ril.R . simulate.R . stepwiseqtl.R . stepwiseqtlX.R . summary.cross.R . summary.scanone.R . summary.scantwo.R . summary.scantwo.old.R . transformPheno.R . tryallpositions.R . util.R . vbscan.R . viridis.R . write.cross.R . write.cross.mq.R . write.cross.qtab.R . xchr.R . Full qtl package functions and examples
Downloads during the last 30 days
Today's Hot Picks in Authors and Packages
eyelinker
Import ASC Files from EyeLink Eye Trackers
Imports plain-text ASC data files from EyeLink eye trackers
into (relatively) tidy data frames for ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Austin Hurst (view profile)
hmeasure
The H-Measure and Other Scalar Classification Performance Metrics
Classification performance metrics that are derived from the ROC
curve of a classifier. The package ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Christoforos Anagnostopoulos (view profile)
data360r
Wrapper for 'TCdata360' and 'Govdata360' API
Makes it easy to engage with the Application Program Interface (API)
of the 'TCdata360' and 'Govdat ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Ramin Aliyev (view profile)
injectoR
R Dependency Injection
R dependency injection framework. Dependency injection allows
a program design to follow the depend ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Lev Kuznetsov (view profile)
downlit
Syntax Highlighting and Automatic Linking
Syntax highlighting of R code, specifically designed for the
needs of 'RMarkdown' packages like 'pk ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Hadley Wickham (view profile)
r2resize
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
28,565
R Packages
239,283
Dependencies
75,677
Author Associations
28,566
Publication Badges
