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qfasar
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Download and install qfasar package within the R console
Install from CRAN:
install.packages("qfasar")
Install from Github:
library("remotes")
install_github("cran/qfasar")
Install by package version:
library("remotes")
install_version("qfasar", "1.2.1")
Attach the package and use:
library("qfasar")
Maintained by
Jeffrey F. Bromaghin
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-08-25
Latest Update: 2020-03-19
Description:
An implementation of Quantitative Fatty Acid Signature
Analysis (QFASA) in R. QFASA is a method of estimating the diet
composition of predators. The fundamental unit of information in
QFASA is a fatty acid signature (signature), which is a vector of
proportions describing the composition of fatty acids within lipids.
Signature data from at least one predator and from samples of all
potential prey types are required. Calibration coefficients, which
adjust for the differential metabolism of individual fatty acids by
predators, are also required. Given those data inputs, a predator
signature is modeled as a mixture of prey signatures and its diet
estimate is obtained as the mixture that minimizes a measure of
distance between the observed and modeled signatures. A variety of
estimation options and simulation capabilities are implemented.
Please refer to the vignette for additional details and references.
How to cite:
Jeffrey F. Bromaghin (2016). qfasar: Quantitative Fatty Acid Signature Analysis in R. R package version 1.2.1, https://cran.r-project.org/web/packages/qfasar. Accessed 21 Dec. 2024.
Previous versions and publish date:
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Complete documentation for qfasar
Functions, R codes and Examples using
the qfasar R package
Some associated functions: add_cc_err . adj_diet_fat . cc_aug . comp_chi_gamma . diet_obj_func . diet_pool . dimac . dist_between_2_sigs . dist_pairs_map . dist_sigs_2_mean . dist_sum_pairwise . est_diet . find_boot_ss . gof . lopo . lopo_pool . make_diet_grid . make_diet_rand . make_ghost . make_pred_sigs . make_prey_part . pm_obj_func . pred_beyond_prey . prep_fa . prep_sig . sig_rep_zero . sig_scale .
Some associated R codes: add_cc_err.R . adj_diet_fat.R . cc_aug.R . comp_chi_gamma.R . diet_obj_func.R . diet_pool.R . dimac.R . dist_between_2_sigs.R . dist_pairs_map.R . dist_sigs_2_mean.R . dist_sum_pairwise.R . est_diet.R . find_boot_ss.R . gof.R . lopo.R . lopo_pool.R . make_diet_grid.R . make_diet_rand.R . make_ghost.R . make_pred_sigs.R . make_prey_part.R . pm_obj_func.R . pred_beyond_prey.R . prep_fa.R . prep_sig.R . sig_rep_zero.R . sig_scale.R . Full qfasar package functions and examples
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