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qcQpcr  

Histone ChIP-Seq qPCR Analyzer
View on CRAN: Click here


Download and install qcQpcr package within the R console
Install from CRAN:
install.packages("qcQpcr")

Install from Github:
library("remotes")
install_github("cran/qcQpcr")

Install by package version:
library("remotes")
install_version("qcQpcr", "1.5")



Attach the package and use:
library("qcQpcr")
Maintained by
Alireza Lorzadeh
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-02-08
Latest Update: 2018-02-08
Description:
Quality control of chromatin immunoprecipitation libraries (ChIP-seq) by quantitative polymerase chain reaction (qPCR). This function calculates Enrichment value with respect to reference for each histone modification (specific to 'Vii7' software ). This function is applicable to full panel of histone modifications described by International Human Epigenomic Consortium (IHEC).
How to cite:
Alireza Lorzadeh (2018). qcQpcr: Histone ChIP-Seq qPCR Analyzer. R package version 1.5, https://cran.r-project.org/web/packages/qcQpcr. Accessed 27 Jan. 2025.
Previous versions and publish date:
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Complete documentation for qcQpcr
Functions, R codes and Examples using the qcQpcr R package
Some associated functions: SampleTest . qcQpcr-package . qcQpcr . 
Some associated R codes: qcQpcr.R .  Full qcQpcr package functions and examples
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