Other packages > Find by keyword >

propOverlap  

Feature (gene) selection based on the Proportional Overlapping Scores
View on CRAN: Click here


Download and install propOverlap package within the R console
Install from CRAN:
install.packages("propOverlap")

Install from Github:
library("remotes")
install_github("cran/propOverlap")

Install by package version:
library("remotes")
install_version("propOverlap", "1.0")



Attach the package and use:
library("propOverlap")
Maintained by
Osama Mahmoud
[Scholar Profile | Author Map]
First Published: 2014-09-15
Latest Update: 2014-09-15
Description:
A package for selecting the most relevant features (genes) in the high-dimensional binary classification problems. The discriminative features are identified using analyzing the overlap between the expression values across both classes. The package includes functions for measuring the proportional overlapping score for each gene avoiding the outliers effect. The used measure for the overlap is the one defined in the "Proportional Overlapping Score (POS)" technique for feature selection. A gene mask which represents a gene's classification power can also be produced for each gene (feature). The set size of the selected genes might be set by the user. The minimum set of genes that correctly classify the maximum number of the given tissue samples (observations) can be also produced.
How to cite:
Osama Mahmoud (2014). propOverlap: Feature (gene) selection based on the Proportional Overlapping Scores. R package version 1.0, https://cran.r-project.org/web/packages/propOverlap. Accessed 06 May. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited propOverlap R package
View propOverlap citation profile
Other R packages that propOverlap depends, imports, suggests or enhances
Complete documentation for propOverlap
Functions, R codes and Examples using the propOverlap R package
Some associated functions: CoreIntervals . GMask . POS . RDC . Sel.Features . leukaemia . lung . propOverlap-internals . propOverlap-package . 
Some associated R codes: CoreIntervals.R . GMask.R . Min.Set.R . POS.R . RDC.R . Sel.Features.R . block.R .  Full propOverlap package functions and examples
Downloads during the last 30 days
04/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/0205/0305/0405/05Downloads for propOverlap02468101214161820TrendBars

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
netUtils  
A Collection of Tools for Network Analysis
Provides a collection of network analytic (convenience) functions which are missing in other standar ...
Download / Learn more Package Citations See dependency  
HuraultMisc  
Guillem Hurault Functions' Library
Contains various functions for data analysis, notably helpers and diagnostics for Bayesian modelling ...
Download / Learn more Package Citations See dependency  
tbrf  
Time-Based Rolling Functions
Provides rolling statistical functions based on date and time windows instead of n-lagged observatio ...
Download / Learn more Package Citations See dependency  
simfam  
Simulate and Model Family Pedigrees with Structured Founders
The focus is on simulating and modeling families with founders drawn from a structured population (f ...
Download / Learn more Package Citations See dependency  
tashu  
Analysis and Prediction of Bicycle Rental Amount
Provides functions for analyzing citizens' bicycle usage pattern and predicting rental amount on spe ...
Download / Learn more Package Citations See dependency  

24,205

R Packages

207,311

Dependencies

65,312

Author Associations

24,206

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA