Other packages > Find by keyword >

prioGene  

Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information
View on CRAN: Click here


Download and install prioGene package within the R console
Install from CRAN:
install.packages("prioGene")

Install from Github:
library("remotes")
install_github("cran/prioGene")

Install by package version:
library("remotes")
install_version("prioGene", "1.0.1")



Attach the package and use:
library("prioGene")
Maintained by
Erqiang Hu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-30
Latest Update: 2020-02-01
Description:
In gene sequencing methods, the topological features of protein-protein interaction (PPI) networks are often used, such as ToppNet . In this study, a candidate gene prioritization method was proposed for non-communicable diseases considering disease risks transferred between genes in weighted disease PPI networks with weights for nodes and edges based on functional information.
How to cite:
Erqiang Hu (2019). prioGene: Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information. R package version 1.0.1, https://cran.r-project.org/web/packages/prioGene. Accessed 17 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:43), 0.99.0 (2019-08-30 08:50), 1.0.0 (2020-01-08 07:10), 1.0.1 (2020-02-01 18:00)
Other packages that cited prioGene R package
View prioGene citation profile
Other R packages that prioGene depends, imports, suggests or enhances
Complete documentation for prioGene
Functions, R codes and Examples using the prioGene R package
Some associated functions: R_0 . deal_net . dise_gene . edge_weight . genes_mat . get_Q . get_R . get_R_0 . get_W . get_edge_weight . get_gene_mat . get_neighbor . get_net_disease_term . get_node_weight . get_term_mat . metabolic_net . net . net_disease . net_disease_term . node_weight . terms_mat . 
Some associated R codes: data.R . deal_GO.R . deal_net.R . prioritization.R . weight.R .  Full prioGene package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

alabama  
Constrained Nonlinear Optimization
Augmented Lagrangian Adaptive Barrier Minimization Algorithm for optimizing smooth nonlinear object ...
Download / Learn more Package Citations See dependency  
FastKNN  
Fast k-Nearest Neighbors
Compute labels for a test set according to the k-Nearest Neighbors classification. This is a fast wa ...
Download / Learn more Package Citations See dependency  
VFS  
Vegetated Filter Strip and Erosion Model
Empirical models for runoff, erosion, and phosphorus loss across a vegetated filter strip, given sl ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
rt.test  
Robustified t-Test
Performs one-sample t-test based on robustified statistics using median/MAD (TA) and Hodges-Lehmann/ ...
Download / Learn more Package Citations See dependency  
VEwaningVariant  
Vaccine Efficacy Over Time - Variant Aware
Implements methods for inference on potential waning of vaccine efficacy and for estimation of vacci ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA