Other packages > Find by keyword >

prioGene  

Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information
View on CRAN: Click here


Download and install prioGene package within the R console
Install from CRAN:
install.packages("prioGene")

Install from Github:
library("remotes")
install_github("cran/prioGene")

Install by package version:
library("remotes")
install_version("prioGene", "1.0.1")



Attach the package and use:
library("prioGene")
Maintained by
Erqiang Hu
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-08-30
Latest Update: 2020-02-01
Description:
In gene sequencing methods, the topological features of protein-protein interaction (PPI) networks are often used, such as ToppNet . In this study, a candidate gene prioritization method was proposed for non-communicable diseases considering disease risks transferred between genes in weighted disease PPI networks with weights for nodes and edges based on functional information.
How to cite:
Erqiang Hu (2019). prioGene: Candidate Gene Prioritization for Non-Communicable Diseases Based on Functional Information. R package version 1.0.1, https://cran.r-project.org/web/packages/prioGene. Accessed 04 Jun. 2026.
Previous versions and publish date:
0.99.0 (2019-08-30 08:50), 1.0.0 (2020-01-08 07:10), 1.0.1 (2020-02-01 18:00)
Other packages that cited prioGene R package
View prioGene citation profile
Other R packages that prioGene depends, imports, suggests or enhances
Complete documentation for prioGene
Functions, R codes and Examples using the prioGene R package
Some associated functions: R_0 . deal_net . dise_gene . edge_weight . genes_mat . get_Q . get_R . get_R_0 . get_W . get_edge_weight . get_gene_mat . get_neighbor . get_net_disease_term . get_node_weight . get_term_mat . metabolic_net . net . net_disease . net_disease_term . node_weight . terms_mat . 
Some associated R codes: data.R . deal_GO.R . deal_net.R . prioritization.R . weight.R .  Full prioGene package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

crplyr  
A 'dplyr' Interface for Crunch
In order to facilitate analysis of datasets hosted on the Crunch data platform ...
Download / Learn more Package Citations See dependency  
phers  
Calculate Phenotype Risk Scores
Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and ...
Download / Learn more Package Citations See dependency  
golem  
A Framework for Robust Shiny Applications
An opinionated framework for building a production-ready 'Shiny' application. This package contains ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
AMPLE  
Shiny Apps to Support Capacity Building on Harvest Control Rules
Three Shiny apps are provided that introduce Harvest Control Rules (HCR) for fisheries management. ...
Download / Learn more Package Citations See dependency  
murphydiagram  
Murphy Diagrams for Forecast Comparisons
Data and code for the paper by Ehm, Gneiting, Jordan and Krueger ('Of Quantiles and Expectiles: Con ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA