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poolABC  

Approximate Bayesian Computation with Pooled Sequencing Data
View on CRAN: Click here


Download and install poolABC package within the R console
Install from CRAN:
install.packages("poolABC")

Install from Github:
library("remotes")
install_github("cran/poolABC")

Install by package version:
library("remotes")
install_version("poolABC", "1.0.0")



Attach the package and use:
library("poolABC")
Maintained by
João Carvalho
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2023-08-08
Latest Update: 2023-08-08
Description:
Provides functions to simulate Pool-seq data under models of demographic formation and to import Pool-seq data from real populations. Implements two ABC algorithms for performing parameter estimation and model selection using Pool-seq data. Cross-validation can also be performed to assess the accuracy of ABC estimates and model choice. Carvalho et al., (2022) .
How to cite:
João Carvalho (2023). poolABC: Approximate Bayesian Computation with Pooled Sequencing Data. R package version 1.0.0, https://cran.r-project.org/web/packages/poolABC. Accessed 21 Nov. 2024.
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