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pipeGS
View on CRAN: Click
here
Download and install pipeGS package within the R console
Install from CRAN:
install.packages("pipeGS")
Install from Github:
library("remotes")
install_github("cran/pipeGS")
Install by package version:
library("remotes")
install_version("pipeGS", "0.4")
Attach the package and use:
library("pipeGS")
Maintained by
Hera He
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2016-11-17
Latest Update: 2018-02-02
Description:
Code for various permutation p-values estimation methods for gene set test. The description of corresponding methods can be found in the dissertation of Yu He(2016) "Efficient permutation P-value estimation for gene set tests" . One of the methods also corresponds to the paper "Permutation p-value approximation via generalized Stolarsky invariance" .
How to cite:
Hera He (2016). pipeGS: Permutation p-Value Estimation for Gene Set Tests. R package version 0.4, https://cran.r-project.org/web/packages/pipeGS. Accessed 21 Dec. 2024.
Previous versions and publish date:
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Other R packages that pipeGS depends,
imports, suggests or enhances
Functions, R codes and Examples using
the pipeGS R package
Some associated functions: get.phat.linear . get.phat.quadratic . pipegs .
Some associated R codes: functiondef.R . main.R . montecarlo.R . nested.R . normalize.R . parallelexact.R . pipegs.R . saddlepoint.R . stolarsky.R . Full pipeGS package functions and examples
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