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phyreg  

The Phylogenetic Regression of Grafen (1989)
View on CRAN: Click here


Download and install phyreg package within the R console
Install from CRAN:
install.packages("phyreg")

Install from Github:
library("remotes")
install_github("cran/phyreg")

Install by package version:
library("remotes")
install_version("phyreg", "1.0.2")



Attach the package and use:
library("phyreg")
Maintained by
Alan Grafen
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-02-08
Latest Update: 2018-04-12
Description:
Provides general linear model facilities (single y-variable, multiple x-variables with arbitrary mixture of continuous and categorical and arbitrary interactions) for cross-species data. The method is, however, based on the nowadays rather uncommon situation in which uncertainty about a phylogeny is well represented by adopting a single polytomous tree. The theory is in A. Grafen (1989, Proc. R. Soc. B 326, 119-157) and aims to cope with both recognised phylogeny (closely related species tend to be similar) and unrecognised phylogeny (a polytomy usually indicates ignorance about the true sequence of binary splits).
How to cite:
Alan Grafen (2014). phyreg: The Phylogenetic Regression of Grafen (1989). R package version 1.0.2, https://cran.r-project.org/web/packages/phyreg. Accessed 27 Aug. 2026.
Previous versions and publish date:
(2026-07-09 06:41), 0.7 (2014-02-08 11:18), 1.0.1 (2018-04-08 16:55)
Other packages that cited phyreg R package
View phyreg citation profile
Other R packages that phyreg depends, imports, suggests or enhances
Complete documentation for phyreg
Functions, R codes and Examples using the phyreg R package
Some associated functions: factory_default . inf . myd0 . phyfromnewick . phyreg-package . phyreg . 
Some associated R codes: accEnv.R . factory_default.R . inf.R . new_default.R . phyfromnewick.R . phyfromphylo.R . phyreg-internal.R . phyreg.R .  Full phyreg package functions and examples
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