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phymapnet  

Phylogeny-Guided Bayesian Microbial Network Inference
View on CRAN: Click here


Download and install phymapnet package within the R console
Install from CRAN:
install.packages("phymapnet")

Install from Github:
library("remotes")
install_github("cran/phymapnet")

Install by package version:
library("remotes")
install_version("phymapnet", "0.1.2")



Attach the package and use:
library("phymapnet")
Maintained by
Rosa Aghdam
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-02-25
Latest Update: 2026-02-25
Description:
Implements a phylogeny-aware Bayesian graphical modeling framework for microbial network inference using a shrinkage precision estimator guided by a phylogenetic kernel, with optional hyperparameter-ensemble edge reliability analysis.
How to cite:
Rosa Aghdam (2026). phymapnet: Phylogeny-Guided Bayesian Microbial Network Inference. R package version 0.1.2, https://cran.r-project.org/web/packages/phymapnet. Accessed 06 Aug. 2026.
Previous versions and publish date:
(2026-07-09 06:41), 0.1.2 (2026-02-25 11:10)
Other packages that cited phymapnet R package
View phymapnet citation profile
Other R packages that phymapnet depends, imports, suggests or enhances
Complete documentation for phymapnet
Functions, R codes and Examples using the phymapnet R package
Full phymapnet package functions and examples
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