Other packages > Find by keyword >

phylosignalDB  

Explore Phylogenetic Signals Using Distance-Based Methods
View on CRAN: Click here


Download and install phylosignalDB package within the R console
Install from CRAN:
install.packages("phylosignalDB")

Install from Github:
library("remotes")
install_github("cran/phylosignalDB")

Install by package version:
library("remotes")
install_version("phylosignalDB", "0.2.2")



Attach the package and use:
library("phylosignalDB")
Maintained by
Liang Yao
[Scholar Profile | Author Map]
First Published: 2025-01-16
Latest Update: 2025-01-16
Description:
A unified method, called M statistic, is provided for detecting phylogenetic signals in continuous traits, discrete traits, and multi-trait combinations. Blomberg and Garland (2002) <doi:10.1046/j.1420-9101.2002.00472.x> provided a widely accepted statistical definition of the phylogenetic signal, which is the "tendency for related species to resemble each other more than they resemble species drawn at random from the tree". The M statistic strictly adheres to the definition of phylogenetic signal, formulating an index and developing a method of testing in strict accordance with the definition, instead of relying on correlation analysis or evolutionary models. The novel method equivalently expressed the textual definition of the phylogenetic signal as an inequality equation of the phylogenetic and trait distances and constructed the M statistic. Also, there are more distance-based methods under development.
How to cite:
Liang Yao (2025). phylosignalDB: Explore Phylogenetic Signals Using Distance-Based Methods. R package version 0.2.2, https://cran.r-project.org/web/packages/phylosignalDB. Accessed 03 May. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited phylosignalDB R package
View phylosignalDB citation profile
Other R packages that phylosignalDB depends, imports, suggests or enhances
Complete documentation for phylosignalDB
Functions, R codes and Examples using the phylosignalDB R package
Full phylosignalDB package functions and examples
Downloads during the last 30 days
04/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/3005/01Downloads for phylosignalDB246810121416TrendBars

Today's Hot Picks in Authors and Packages

r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
farrell  
Interactive Interface to Data Envelopment Analysis Modeling
Allows the user to execute interactively radial data envelopment analysis models. The user has the a ...
Download / Learn more Package Citations See dependency  
TestDesign  
Optimal Test Design Approach to Fixed and Adaptive Test Construction
Uses the optimal test design approach by Birnbaum (1968, ISBN:9781593119348) and van der Linden (201 ...
Download / Learn more Package Citations See dependency  
mlr3fselect  
Feature Selection for 'mlr3'
Feature selection package of the 'mlr3' ecosystem. It selects the optimal feature set for any 'mlr3 ...
Download / Learn more Package Citations See dependency  
nlsem  
Fitting Structural Equation Mixture Models
Estimation of structural equation models with nonlinear effects and underlying nonnormal distributi ...
Download / Learn more Package Citations See dependency  
grabsampling  
Probability of Detection for Grab Sample Selection
Functions for obtaining the probability of detection, for grab samples selection by using two differ ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,312

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA