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phyloseqGraphTest
View on CRAN: Click
here
Download and install phyloseqGraphTest package within the R console
Install from CRAN:
install.packages("phyloseqGraphTest")
Install from Github:
library("remotes")
install_github("cran/phyloseqGraphTest") Install by package version:
library("remotes")
install_version("phyloseqGraphTest", "0.1.1") Attach the package and use:
library("phyloseqGraphTest")
Maintained by
Julia Fukuyama
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All associated links for this package
First Published: 2018-03-15
Latest Update: 2024-02-05
Description:
Provides functions for graph-based multiple-sample
testing and visualization of microbiome data, in particular data
stored in 'phyloseq' objects. The tests are based on those
described in Friedman and Rafsky (1979)
, and the tests are described
in more detail in Callahan et al. (2016)
.
How to cite:
Julia Fukuyama (2018). phyloseqGraphTest: Graph-Based Permutation Tests for Microbiome Data. R package version 0.1.1, https://cran.r-project.org/web/packages/phyloseqGraphTest. Accessed 05 Aug. 2026.
Previous versions and publish date:
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imports, suggests or enhances
Complete documentation for phyloseqGraphTest
Functions, R codes and Examples using
the phyloseqGraphTest R package
Some associated functions: graph_perm_test . permute . phyloseqGraphTest-package . plot_permutations . plot_test_network . print.psgraphtest . validGrouping .
Some associated R codes: graphtest-functions.R . package-doc.R . Full phyloseqGraphTest package functions and examples
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