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phylosem
View on CRAN: Click
here
Download and install phylosem package within the R console
Install from CRAN:
install.packages("phylosem")
Install from Github:
library("remotes")
install_github("cran/phylosem")
Install by package version:
library("remotes")
install_version("phylosem", "1.1.4")
Attach the package and use:
library("phylosem")
Maintained by
James Thorson
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
10.32614/CRAN.package.phylosem . https://github.com/James-Thorson-NOAA/phylosem/issues . https://james-thorson-noaa.github.io/phylosem/ . phylosem citation info . phylosem results . phylosem.pdf . phylosem_1.1.4.tar.gz . phylosem_1.1.4.zip . phylosem_1.1.4.zip . phylosem_1.1.4.zip . phylosem_1.1.4.tgz . phylosem_1.1.4.tgz . phylosem_1.1.4.tgz . phylosem_1.1.4.tgz . phylosem_1.1.4.tgz . phylosem_1.1.4.tgz . phylosem archive . https://CRAN.R-project.org/package=phylosem .
First Published: 2023-08-25
Latest Update: 2024-02-01
Description:
Applies phylogenetic comparative methods (PCM) and phylogenetic trait imputation using
structural equation models (SEM), extending methods from Thorson et al. (2023) .
This implementation includes a minimal set of features, to
allow users to easily read all of the documentation and source code. PCM using SEM
includes phylogenetic linear models and structural equation models as nested submodels,
but also allows imputation of missing values. Features and comparison with other packages
are described in Thorson and van der Bijl (2023) .
How to cite:
James Thorson (2023). phylosem: Phylogenetic Structural Equation Model. R package version 1.1.4, https://cran.r-project.org/web/packages/phylosem. Accessed 10 Apr. 2025.
Previous versions and publish date:
Other packages that cited phylosem R package
View phylosem citation profile
Other R packages that phylosem depends,
imports, suggests or enhances
Complete documentation for phylosem
Functions, R codes and Examples using
the phylosem R package
Some associated functions: Mlifehist_ver1_0 . as_fitted_DAG . as_phylo4d . as_sem . average.compare_phylosem . average . best.compare_phylosem . best . checkDepPackageVersion . choice.compare_phylosem . choice . coef.phylosem . compare_phylosem . list_parameters . parse_path . phylosem . phylosem_control . print.phylosem . reinstalling . summary.phylosem . vcov.phylosem .
Some associated R codes: coerce_methods.R . compare_phylosem.R . data.R . list_parameters.R . parse_path.R . phylosem.R . utils.R . zzz.R . Full phylosem package functions and examples
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