Other packages > Find by keyword >

phyloatlas  

Access to the 'Phylo-Species Atlas' of Empirical Phylogenies
View on CRAN: Click here


Download and install phyloatlas package within the R console
Install from CRAN:
install.packages("phyloatlas")

Install from Github:
library("remotes")
install_github("cran/phyloatlas")

Install by package version:
library("remotes")
install_version("phyloatlas", "0.1.0")



Attach the package and use:
library("phyloatlas")
Maintained by
Francisco Richter
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2026-06-04
Latest Update: 2026-06-04
Description:
Provides convenience functions to fetch standardized phylogenetic trees and per-tree provenance metadata from the 'Phylo-Species Atlas' <https://github.com/franciscorichter/phylo-species-atlas> directly from R. The atlas is a curated collection of empirical species-level trees covering Bacteria, Archaea, and Eukaryota, organized into 62 partitions of life with tip labels normalized against a shared dictionary of standardized species identifiers. Functions load any of the standardized trees with species labels resolved from the dictionary, list available trees, and inspect per-tree provenance.
How to cite:
Francisco Richter (2026). phyloatlas: Access to the 'Phylo-Species Atlas' of Empirical Phylogenies. R package version 0.1.0, https://cran.r-project.org/web/packages/phyloatlas. Accessed 06 Aug. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited phyloatlas R package
View phyloatlas citation profile
Other R packages that phyloatlas depends, imports, suggests or enhances
Complete documentation for phyloatlas
Functions, R codes and Examples using the phyloatlas R package
Full phyloatlas package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

TMDb  
Access to TMDb API
Provides an R-interface to the TMDb API (see TMDb API on < ...
Download / Learn more Package Citations See dependency  
lsmeans  
Least-Squares Means
Obtain least-squares means for linear, generalized linear, and mixed models. Compute contrasts or l ...
Download / Learn more Package Citations See dependency  
RRedshiftSQL  
R Interface to the 'Redshift' Database
Superclasses 'PostgreSQL' connection to help enable full 'dplyr' functionality on 'Redshift'. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
SAMBA  
Selection and Misclassification Bias Adjustment for Logistic Regression Models
Health research using data from electronic health records (EHR) has gained popularity, but miscla ...
Download / Learn more Package Citations See dependency  

28,083

R Packages

239,283

Dependencies

74,457

Author Associations

28,084

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA