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phylin
View on CRAN: Click
here
Download and install phylin package within the R console
Install from CRAN:
install.packages("phylin")
Install from Github:
library("remotes")
install_github("cran/phylin")
Install by package version:
library("remotes")
install_version("phylin", "2.0.2")
Attach the package and use:
library("phylin")
Maintained by
Pedro Tarroso
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-07-25
Latest Update: 2019-12-12
Description:
The spatial interpolation of genetic distances between
samples is based on a modified kriging method that
accepts a genetic distance matrix and generates a map of
probability of lineage presence. This package also offers
tools to generate a map of potential contact zones
between groups with user-defined thresholds in the tree
to account for old and recent divergence. Additionally,
it has functions for IDW interpolation using genetic data
and midpoints.
How to cite:
Pedro Tarroso (2014). phylin: Spatial Interpolation of Genetic Data. R package version 2.0.2, https://cran.r-project.org/web/packages/phylin
Previous versions and publish date:
Other packages that cited phylin R package
View phylin citation profile
Other R packages that phylin depends,
imports, suggests or enhances
Functions, R codes and Examples using
the phylin R package
Some associated functions: d.gen . extract.var . gen.variogram . geo.dist . grid.image . grid . gv.model . idw . intgen.idw . krig . midpoints . mpinv . mtest.gv . multispecies . phylin-package . plot.gv . predict.gv . print.gv . simul.env . simul.gen.dist . simul.sample . summary.gv . vipers .
Some associated R codes: extract.val.R . gen.variogram.R . gen.variogram.multi.R . gen.variogram.single.R . geo.dist.R . grid.image.R . gv.model.R . idw.R . intgen.idw.R . krig.R . midpoints.R . mpinv.R . mtest.gv.R . multispecies.R . plot.gv.R . predict.gv.R . print.gv.R . summary.gv.R . Full phylin package functions and examples
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