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phoenics  

Pathways Longitudinal and Differential Analysis in Metabolomics
View on CRAN: Click here


Download and install phoenics package within the R console
Install from CRAN:
install.packages("phoenics")

Install from Github:
library("remotes")
install_github("cran/phoenics")

Install by package version:
library("remotes")
install_version("phoenics", "0.5")



Attach the package and use:
library("phoenics")
Maintained by
Camille Guilmineau
[Scholar Profile | Author Map]
First Published: 2024-05-22
Latest Update: 2024-05-22
Description:
Perform a differential analysis at pathway level based on metabolite quantifications and information on pathway metabolite composition. The method is based on a Principal Component Analysis step and on a linear mixed model. Automatic query of metabolic pathways is also implemented.
How to cite:
Camille Guilmineau (2024). phoenics: Pathways Longitudinal and Differential Analysis in Metabolomics. R package version 0.5, https://cran.r-project.org/web/packages/phoenics. Accessed 22 Feb. 2025.
Previous versions and publish date:
0.1 (2024-05-22 14:20), 0.2 (2024-06-27 10:50), 0.3 (2024-07-22 15:00), 0.4 (2024-12-12 11:00)
Other packages that cited phoenics R package
View phoenics citation profile
Other R packages that phoenics depends, imports, suggests or enhances
Complete documentation for phoenics
Functions, R codes and Examples using the phoenics R package
Full phoenics package functions and examples
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