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pez  

Phylogenetics for the Environmental Sciences
View on CRAN: Click here


Download and install pez package within the R console
Install from CRAN:
install.packages("pez")

Install from Github:
library("remotes")
install_github("cran/pez")

Install by package version:
library("remotes")
install_version("pez", "1.2-5")



Attach the package and use:
library("pez")
Maintained by
William D. Pearse
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2014-11-08
Latest Update: 2025-09-01
Description:
Eco-phylogenetic and community phylogenetic analyses. Keeps community ecological and phylogenetic data matched up and comparable using 'comparative.comm' objects. Wrappers for common community phylogenetic indices ('pez.shape', 'pez.evenness', 'pez.dispersion', and 'pez.dissimilarity' metrics). Implementation of Cavender-Bares (2004) correlation of phylogenetic and ecological matrices ('fingerprint.regression'). Phylogenetic Generalised Linear Mixed Models (PGLMMs; 'pglmm') following Ives & Helmus (2011) and Rafferty & Ives (2013). Simulation of null assemblages, traits, and phylogenies ('scape', 'sim.meta.comm').
How to cite:
William D. Pearse (2014). pez: Phylogenetics for the Environmental Sciences. R package version 1.2-5, https://cran.r-project.org/web/packages/pez. Accessed 26 Aug. 2026.
Previous versions and publish date:
(2026-07-09 06:40), 0.9-0 (2014-11-08 01:44), 1.0-0 (2015-02-11 19:56), 1.1-0 (2015-08-06 07:16), 1.1-1 (2016-01-15 17:59), 1.2-0 (2019-02-27 06:40), 1.2-1 (2020-07-26 23:00), 1.2-2 (2020-10-12 15:30), 1.2-3 (2021-06-17 14:00), 1.2-4 (2022-08-31 20:00)
Other packages that cited pez R package
View pez citation profile
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Complete documentation for pez
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