Other packages > Find by keyword >

peptoolkit  

A Toolkit for Using Peptide Sequences in Machine Learning
View on CRAN: Click here


Download and install peptoolkit package within the R console
Install from CRAN:
install.packages("peptoolkit")

Install from Github:
library("remotes")
install_github("cran/peptoolkit")

Install by package version:
library("remotes")
install_version("peptoolkit", "0.0.1")



Attach the package and use:
library("peptoolkit")
Maintained by
Josep-Ramon Codina
[Scholar Profile | Author Map]
First Published: 2023-07-13
Latest Update: 2023-07-13
Description:
This toolkit is designed for manipulation and analysis of peptides. It provides functionalities to assist researchers in peptide engineering and proteomics. Users can manipulate peptides by adding amino acids at every position, count occurrences of each amino acid at each position, and transform amino acid counts based on probabilities. The package offers functionalities to select the best versus the worst peptides and analyze these peptides, which includes counting specific residues, reducing peptide sequences, extracting features through One Hot Encoding (OHE), and utilizing Quantitative Structure-Activity Relationship (QSAR) properties (based in the package 'Peptides' by Osorio et al. (2015) ). This package is intended for both researchers and bioinformatics enthusiasts working on peptide-based projects, especially for their use with machine learning.
How to cite:
Josep-Ramon Codina (2023). peptoolkit: A Toolkit for Using Peptide Sequences in Machine Learning. R package version 0.0.1, https://cran.r-project.org/web/packages/peptoolkit. Accessed 10 Apr. 2025.
Previous versions and publish date:
No previous versions
Other packages that cited peptoolkit R package
View peptoolkit citation profile
Other R packages that peptoolkit depends, imports, suggests or enhances
Complete documentation for peptoolkit
Downloads during the last 30 days
03/1103/1203/1303/1403/1503/1603/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/0504/0604/0704/08Downloads for peptoolkit0123456789101112TrendBars

Today's Hot Picks in Authors and Packages

webglobe  
3D Interactive Globes
Displays geospatial data on an interactive 3D globe in the web browser. ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
RODBC  
ODBC Database Access
xtermStyle  
Terminal Text Formatting Using Escape Sequences
Can be used for coloring output in terminals. It was developed for the standard Ubuntu terminal but ...
Download / Learn more Package Citations See dependency  
ecochange  
Integrating Ecosystem Remote Sensing Products to Derive EBV Indicators
Essential Biodiversity Variables (EBV) are state variables with dimensions on time, space, and biolo ...
Download / Learn more Package Citations See dependency  
txtq  
A Small Message Queue for Parallel Processes
This queue is a data structure that lets parallel processes send and receive messages, and it can he ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA