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pepr
View on CRAN: Click
here
Download and install pepr package within the R console
Install from CRAN:
install.packages("pepr")
Install from Github:
library("remotes")
install_github("cran/pepr")
Install by package version:
library("remotes")
install_version("pepr", "0.5.0")
Attach the package and use:
library("pepr")
Maintained by
Nathan Sheffield
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-06-04
Latest Update: 2023-11-21
Description:
A PEP, or Portable Encapsulated Project, is a dataset that
subscribes to the PEP structure for organizing metadata. It is written using
a simple YAML + CSV format, it is your one-stop solution to metadata
management across data analysis environments. This package reads this
standardized project configuration structure into R.
Described in Sheffield et al. (2021) .
How to cite:
Nathan Sheffield (2020). pepr: Reading Portable Encapsulated Projects. R package version 0.5.0, https://cran.r-project.org/web/packages/pepr. Accessed 07 Nov. 2024.
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Other R packages that pepr depends,
imports, suggests or enhances
Complete documentation for pepr
Functions, R codes and Examples using
the pepr R package
Some associated functions: Config-class . Project-class . Project . activateAmendments . checkSection . config . dot-appendAttrs . dot-applyAmendments . dot-applyImports . dot-autoMergeDuplicatedNames . dot-checkSection . dot-deriveAttrs . dot-duplicateAttrs . dot-expandList . dot-expandPath . dot-getSampleTablePathFromConfig . dot-getSubSampleTablePathFromConfig . dot-getSubscript . dot-getTableIndexes . dot-implyAttrs . dot-inferProjectName . dot-isAbsolute . dot-isCfg . dot-isValidUrl . dot-listifyDF . dot-loadConfig . dot-loadSampleAnnotation . dot-loadSubsampleAnnotation . dot-makeAbsPath . dot-matchesAndRegexes . dot-mergeAttrs . dot-modifySamples . dot-printNestedList . dot-reformat . dot-removeAttrs . dot-safeFileExists . dot-strformat . fetchSamples . getSample . getSubsample . listAmendments . makeSectionsAbsolute . pepr . sampleTable . select-config .
Some associated R codes: config.R . constants.R . pepr.R . project.R . utils.R . Full pepr package functions and examples
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