Other packages > Find by keyword >

pegas  

Population and Evolutionary Genetics Analysis System
View on CRAN: Click here


Download and install pegas package within the R console
Install from CRAN:
install.packages("pegas")

Install from Github:
library("remotes")
install_github("cran/pegas")

Install by package version:
library("remotes")
install_version("pegas", "1.3")



Attach the package and use:
library("pegas")
Maintained by
Emmanuel Paradis
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2009-05-13
Latest Update: 2023-02-23
Description:
Functions for reading, writing, plotting, analysing, and manipulating allelic and haplotypic data, including from VCF files, and for the analysis of population nucleotide sequences and micro-satellites including coalescent analyses, linkage disequilibrium, population structure (Fst, Amova) and equilibrium (HWE), haplotype networks, minimum spanning tree and network, and median-joining networks.
How to cite:
Emmanuel Paradis (2009). pegas: Population and Evolutionary Genetics Analysis System. R package version 1.3, https://cran.r-project.org/web/packages/pegas
Previous versions and publish date:
0.1 (2009-05-13 21:17), 0.2 (2009-10-07 08:38), 0.3-1 (2010-05-19 23:10), 0.3-2 (2010-06-10 08:26), 0.3-3 (2010-11-26 08:24), 0.3-4 (2011-04-01 23:07), 0.3 (2009-12-03 12:43), 0.4-1 (2012-01-19 09:00), 0.4-2 (2012-05-11 14:48), 0.4-3 (2012-07-31 18:06), 0.4-4 (2013-01-23 08:08), 0.4-5 (2013-06-06 17:04), 0.4 (2011-07-23 16:40), 0.5-1 (2014-01-10 17:58), 0.5 (2013-10-08 08:18), 0.6 (2014-08-21 10:24), 0.7 (2015-03-05 22:09), 0.8-1 (2015-06-24 15:33), 0.8-2 (2015-09-25 14:12), 0.8 (2015-05-20 00:04), 0.9 (2016-04-16 00:03), 0.10 (2017-05-03 09:05), 0.11 (2018-07-09 12:30), 0.12 (2019-10-05 06:20), 0.13 (2020-03-10 16:50), 0.14 (2020-09-16 16:10), 1.0-1 (2021-05-17 07:40), 1.0 (2021-04-08 08:50), 1.1 (2021-12-16 13:20), 1.2 (2023-02-23 13:20)
Other packages that cited pegas R package
View pegas citation profile
Other R packages that pegas depends, imports, suggests or enhances
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

critpath  
Setting the Critical Path in Project Management
Solving the problem of project management using CPM (Critical Path Method), PERT (Program Evaluation ...
Download / Learn more Package Citations See dependency  
quickcode  
Quick and Essential 'R' Tricks for Better Scripts
The NOT functions, 'R' tricks and a compilation of some simple quick plus often used 'R' codes to im ...
Download / Learn more Package Citations See dependency  
mistral  
Methods in Structural Reliability
Various reliability analysis methods for rare event inference (computing failure probability and qua ...
Download / Learn more Package Citations See dependency  
steepness  
Testing Steepness of Dominance Hierarchies
The steepness package computes steepness as a property of dominance hierarchies. Steepness is define ...
Download / Learn more Package Citations See dependency  
rdbnomics  
Download DBnomics Data
R access to hundreds of millions data series from DBnomics API (). ...
Download / Learn more Package Citations See dependency  
ftaproxim  
Fault Tree Analysis Based on Proxel Simulation
Calculation and plotting of instantaneous unavailabilities of basic events along with the top event ...
Download / Learn more Package Citations See dependency  

22,114

R Packages

188,080

Dependencies

55,244

Author Associations

22,115

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net. Contact Us / Suggestions / Concerns