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pcalg  

Methods for Graphical Models and Causal Inference
View on CRAN: Click here


Download and install pcalg package within the R console
Install from CRAN:
install.packages("pcalg")

Install from Github:
library("remotes")
install_github("cran/pcalg")

Install by package version:
library("remotes")
install_version("pcalg", "2.7-12")



Attach the package and use:
library("pcalg")
Maintained by
Markus Kalisch
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2006-06-06
Latest Update: 2024-09-12
Description:
Functions for causal structure learning and causal inference using graphical models. The main algorithms for causal structure learning are PC (for observational data without hidden variables), FCI and RFCI (for observational data with hidden variables), and GIES (for a mix of data from observational studies (i.e. observational data) and data from experiments involving interventions (i.e. interventional data) without hidden variables). For causal inference the IDA algorithm, the Generalized Backdoor Criterion (GBC), the Generalized Adjustment Criterion (GAC) and some related functions are implemented. Functions for incorporating background knowledge are provided.
How to cite:
Markus Kalisch (2006). pcalg: Methods for Graphical Models and Causal Inference. R package version 2.7-12, https://cran.r-project.org/web/packages/pcalg. Accessed 07 Oct. 2026.
Previous versions and publish date:
(2026-07-09 06:40), 0.1-3 (2006-06-06 22:35), 0.1-4 (2006-11-02 12:52), 0.1-5 (2007-04-11 19:05), 0.1-6 (2008-04-02 12:17), 0.1-7 (2008-04-16 19:39), 0.1-8 (2009-03-06 17:53), 0.1-9 (2009-09-23 18:45), 1.0-0 (2010-03-14 08:50), 1.0-2 (2010-04-16 11:51), 1.1-2 (2010-10-27 07:09), 1.1-4 (2011-05-09 15:30), 1.1-5 (2012-04-26 19:34), 1.1-6 (2014-03-02 12:45), 2.0-1 (2014-03-07 15:18), 2.0-2 (2014-03-19 16:10), 2.0-3 (2014-07-01 09:33), 2.0-10 (2015-03-19 11:22), 2.2-0 (2015-05-13 17:01), 2.2-2 (2015-06-24 11:15), 2.2-3 (2015-07-12 23:39), 2.2-4 (2015-07-23 09:21), 2.4-2 (2016-09-26 16:47), 2.4-3 (2016-09-28 17:10), 2.4-5 (2017-02-22 09:57), 2.5-0 (2017-07-12 12:41), 2.6-0 (2018-06-04 20:23), 2.6-2 (2019-04-26 00:40), 2.6-5 (2019-08-27 14:00), 2.6-6 (2019-09-16 17:50), 2.6-7 (2019-10-23 16:40), 2.6-8 (2019-11-21 13:00), 2.6-9 (2020-02-11 14:00), 2.6-10 (2020-03-03 15:40), 2.6-11 (2020-08-16 18:00), 2.6-12 (2020-09-22 17:30), 2.7-0 (2020-11-17 09:20), 2.7-1 (2021-01-09 07:30), 2.7-2 (2021-04-22 06:50), 2.7-3 (2021-06-01 10:30), 2.7-4 (2021-11-25 11:10), 2.7-5 (2022-02-22 13:40), 2.7-6 (2022-04-04 13:50), 2.7-7 (2022-10-04 16:20), 2.7-8 (2022-12-21 01:20), 2.7-9 (2023-09-26 07:40), 2.7-10 (2024-02-06 17:10), 2.7-11 (2024-02-12 13:00)
Other packages that cited pcalg R package
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Other R packages that pcalg depends, imports, suggests or enhances
Complete documentation for pcalg
Functions, R codes and Examples using the pcalg R package
Some associated functions: EssGraph-class . GaussL0penIntScore-class . GaussL0penObsScore-class . GaussParDAG-class . LINGAM . ParDAG-class . Score-class . addBgKnowledge . adjustment . ages . amatType . backdoor . beta.special . beta.special.pcObj . binCItest . checkTriple . compareGraphs . condIndFisherZ . corGraph . dag2cpdag . dag2essgraph . dag2pag . disCItest . dreach . dsep . dsepAM . dsepAMTest . dsepTest . fci . fciAlgo-class . fciPlus . find.unsh.triple . gAlgo-class . gac . gds . ges . getGraph . getNextSet . gies . gmB . gmD . gmG . gmI . gmInt . gmL . ida . idaFast . iplotPC . isValidGraph . jointIda . legal.path . mat2targets . mcor . opt.target . optAdjSet . pag2anc . pag2conf . pag2edge . pag2mag . pc.cons.intern . pc . pcAlgo-class . pcAlgo . pcSelect . pcSelect.presel . pcalg-internal . pcalg2dagitty . pcorOrder . pdag2allDags . pdag2dag . pdsep . plotAG . plotSG . possAn . possDe . possibleDe . qreach . r.gauss.pardag . randDAG . randomDAG . rfci . rmvDAG . rmvnorm.ivent . searchAM . shd . showAmat . showEdgeList . simy . skeleton . trueCov . udag2apag . udag2pag . udag2pdag . visibleEdge . wgtMatrix . 
Some associated R codes: Aaux.R . AllClasses.R . adjustment.R . agesFuns.R . deprecated.R . dsepAM.R . fci.R . fciPlus.R . gacFuns.R . genRandDAG.R . gies.R . isValidGraph.R . jointIda.R . lingamFuns.R . optAdjSet.R . pag2anc.R . pag2conf.R . pag2edge.R . pcalg.R . pcalg2dagitty.R . pdsep.R . possDeAn.R . searchAM.R . udag2pag.R . zzz.R .  Full pcalg package functions and examples
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