Other packages > Find by keyword >

pandemics  

Monitoring a Developing Pandemic with Available Data
View on CRAN: Click here


Download and install pandemics package within the R console
Install from CRAN:
install.packages("pandemics")

Install from Github:
library("remotes")
install_github("cran/pandemics")

Install by package version:
library("remotes")
install_version("pandemics", "0.1.0")



Attach the package and use:
library("pandemics")
Maintained by
María Dolores Martínez-Miranda
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2024-09-04
Latest Update: 2024-09-04
Description:
Full dynamic system to describe and forecast the spread and the severity of a developing pandemic, based on available data. These data are number of infections, hospitalizations, deaths and recoveries notified each day. The system consists of three transitions, infection-infection, infection-hospital and hospital-death/recovery. The intensities of these transitions are dynamic and estimated using non-parametric local linear estimators. The package can be used to provide forecasts and survival indicators such as the median time spent in hospital and the probability that a patient who has been in hospital for a number of days can leave it alive. Methods are described in Gámiz, Mammen, Martínez-Miranda, and Nielsen (2024) <doi:10.48550/arXiv.2308.09918> and <doi:10.48550/arXiv.2308.09919>.
How to cite:
María Dolores Martínez-Miranda (2024). pandemics: Monitoring a Developing Pandemic with Available Data. R package version 0.1.0, https://cran.r-project.org/web/packages/pandemics. Accessed 23 Dec. 2024.
Previous versions and publish date:
No previous versions
Other packages that cited pandemics R package
View pandemics citation profile
Other R packages that pandemics depends, imports, suggests or enhances
Complete documentation for pandemics
Functions, R codes and Examples using the pandemics R package
Full pandemics package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by helping add
Reviews / comments / questions /suggestions ↴↴↴

Today's Hot Picks in Authors and Packages

cdmTools  
Useful Tools for Cognitive Diagnosis Modeling
Provides useful tools for cognitive diagnosis modeling (CDM). The package includes functions for emp ...
Download / Learn more Package Citations See dependency  
fasano.franceschini.test  
Fasano-Franceschini Test: A Multivariate Kolmogorov-Smirnov Two-Sample Test
An implementation of the two-sample multivariate Kolmogorov-Smirnov test described by Fasano and Fr ...
Download / Learn more Package Citations See dependency  
GNAR  
Methods for Fitting Network Time Series Models
Simulation of, and fitting models for, Generalised Network Autoregressive (GNAR) time series models ...
Download / Learn more Package Citations See dependency  
dMod  
Dynamic Modeling and Parameter Estimation in ODE Models
The framework provides functions to generate ODEs of reaction networks, parameter transformations, ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
gemma2  
GEMMA Multivariate Linear Mixed Model
Fits a multivariate linear mixed effects model that uses a polygenic term, after Zhou & Stephens (20 ...
Download / Learn more Package Citations See dependency  

23,394

R Packages

201,798

Dependencies

63,416

Author Associations

23,395

Publication Badges

© Copyright 2022 - present. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA