Other packages > Find by keyword >

pammtools  

Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis
View on CRAN: Click here


Download and install pammtools package within the R console
Install from CRAN:
install.packages("pammtools")

Install from Github:
library("remotes")
install_github("cran/pammtools")

Install by package version:
library("remotes")
install_version("pammtools", "0.7.3")



Attach the package and use:
library("pammtools")
Maintained by
Andreas Bender
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-11-16
Latest Update: 2025-03-24
Description:
The Piece-wise exponential (Additive Mixed) Model (PAMM; Bender and others (2018) ) is a powerful model class for the analysis of survival (or time-to-event) data, based on Generalized Additive (Mixed) Models (GA(M)Ms). It offers intuitive specification and robust estimation of complex survival models with stratified baseline hazards, random effects, time-varying effects, time-dependent covariates and cumulative effects (Bender and others (2019)), as well as support for left-truncated, competing risks and recurrent events data. pammtools provides tidy workflow for survival analysis with PAMMs, including data simulation, transformation and other functions for data preprocessing and model post-processing as well as visualization.
How to cite:
Andreas Bender (2018). pammtools: Piece-Wise Exponential Additive Mixed Modeling Tools for Survival Analysis. R package version 0.7.3, https://cran.r-project.org/web/packages/pammtools. Accessed 04 Jun. 2026.
Previous versions and publish date:
0.1.7 (2018-11-16 17:10), 0.1.8 (2019-01-02 14:10), 0.1.9 (2019-03-14 12:00), 0.1.11 (2019-04-18 10:30), 0.1.14 (2019-09-08 16:40), 0.2.1 (2020-02-09 18:30), 0.2.2 (2020-03-12 22:00), 0.2.3 (2020-05-27 12:00), 0.2.4 (2020-06-06 17:50), 0.5.4 (2020-12-18 07:20), 0.5.6 (2021-03-29 12:40), 0.5.7 (2021-06-21 15:00), 0.5.8 (2022-01-09 04:32), 0.5.91 (2023-03-24 13:10), 0.5.92 (2023-07-13 02:10), 0.5.93 (2024-02-25 11:10), 0.7.3 (2025-03-24 16:20)
Other packages that cited pammtools R package
View pammtools citation profile
Other R packages that pammtools depends, imports, suggests or enhances
Complete documentation for pammtools
Functions, R codes and Examples using the pammtools R package
Some associated functions: add_cif . add_hazard . add_surv_prob . add_tdc . add_term . as.data.frame.crps . as_ped . as_ped_cr . calc_ci . combine_df . compute_cumu_diff . cumulative_coefficient . daily . dplyr_verbs . elra_matrix . fcumu . formula_helpers . geom_hazard . geom_stepribbon . get_cif . get_cumu_eff . get_cumu_hazard . get_cumulative . get_cut . get_event_types . get_hazard . get_intervals . get_laglead . get_ped_form . get_plotinfo . get_sim_ci . get_surv_prob . get_tdc_form . get_tdc_vars . get_term . get_terms . gg_fixed . gg_laglead . gg_partial . gg_re . gg_slice . gg_smooth . gg_tensor . has_tdc . int_info . modus . nest_tdc . newdata . pamm . pammtools . patient . ped_info . pipe . predictSurvProb.pamm . prep_concurrent . rpexp . sample_info . seq_range . sim_pexp . sim_pexp_cr . simdf_elra . specials . split_data . split_data_multistate . staph . tidiers . tidy_fixed . tidy_smooth . tidy_smooth2d . tumor . warn_about_new_time_points . 
Some associated R codes: add-functions.R . as-ped.R . convenience-plots.R . cumulative-coefficient.R . cumulative-effect.R . data.R . formula-specials.R . formula-utils.R . geom-hazard.R . get-cut-points.R . get-terms.R . ggplot-extensions.R . helpers.R . interval-information.R . lag-lead-utils.R . make-newdata.R . model-evaluation.R . nest-utils.R . pammfit.R . pammtools.R . predict.R . rpexp.R . sim-pexp.R . split-data.R . tdc-utils.R . tidiers.R . tidyverse-methods.R . utils-pipe.R . viz-elra.R . warnings.R . zzz.R .  Full pammtools package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
golem  
A Framework for Robust Shiny Applications
An opinionated framework for building a production-ready 'Shiny' application. This package contains ...
Download / Learn more Package Citations See dependency  
AMPLE  
Shiny Apps to Support Capacity Building on Harvest Control Rules
Three Shiny apps are provided that introduce Harvest Control Rules (HCR) for fisheries management. ...
Download / Learn more Package Citations See dependency  
murphydiagram  
Murphy Diagrams for Forecast Comparisons
Data and code for the paper by Ehm, Gneiting, Jordan and Krueger ('Of Quantiles and Expectiles: Con ...
Download / Learn more Package Citations See dependency  
crplyr  
A 'dplyr' Interface for Crunch
In order to facilitate analysis of datasets hosted on the Crunch data platform ...
Download / Learn more Package Citations See dependency  
phers  
Calculate Phenotype Risk Scores
Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA