Other packages > Find by keyword >

paleobuddy  

Simulating Diversification Dynamics
View on CRAN: Click here


Download and install paleobuddy package within the R console
Install from CRAN:
install.packages("paleobuddy")

Install from Github:
library("remotes")
install_github("cran/paleobuddy")

Install by package version:
library("remotes")
install_version("paleobuddy", "1.1.0")



Attach the package and use:
library("paleobuddy")
Maintained by
Bruno do Rosario Petrucci
[Scholar Profile | Author Map]
First Published: 2021-12-21
Latest Update: 2021-12-21
Description:
Simulation of species diversification, fossil records, and phylogenies. While the literature on species birth-death simulators is extensive, including important software like 'paleotree' and 'APE', we concluded there were interesting gaps to be filled regarding possible diversification scenarios. Here we strove for flexibility over focus, implementing a large array of regimens for users to experiment with and combine. In this way, 'paleobuddy' can be used in complement to other simulators as a flexible jack of all trades, or, in the case of scenarios implemented only here, can allow for robust and easy simulations for novel situations. Environmental data modified from that in 'RPANDA': Morlon H. et al (2016) .
How to cite:
Bruno do Rosario Petrucci (2021). paleobuddy: Simulating Diversification Dynamics. R package version 1.1.0, https://cran.r-project.org/web/packages/paleobuddy. Accessed 05 Apr. 2025.
Previous versions and publish date:
1.0.0 (2021-12-21 09:50)
Other packages that cited paleobuddy R package
View paleobuddy citation profile
Other R packages that paleobuddy depends, imports, suggests or enhances
Complete documentation for paleobuddy
Downloads during the last 30 days
03/0603/0703/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/2003/2103/2203/2303/2403/2503/2603/2703/2803/3003/3104/0104/0204/03Downloads for paleobuddy024681012141618TrendBars

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
deepdive  
Deep Learning for General Purpose
Aims to provide simple intuitive functions to create quick prototypes of artificial neural network o ...
Download / Learn more Package Citations See dependency  
IGST  
Informative Gene Selection Tool
Mining informative genes with certain biological meanings are important for clinical diagnosis of di ...
Download / Learn more Package Citations See dependency  
leapp  
Latent Effect Adjustment After Primary Projection
These functions take a gene expression value matrix, a primary covariate vector, an additional know ...
Download / Learn more Package Citations See dependency  
whitestrap  
White Test and Bootstrapped White Test for Heteroskedasticity
Formal implementation of White test of heteroskedasticity and a bootstrapped version of it, develope ...
Download / Learn more Package Citations See dependency  
gllvm  
Generalized Linear Latent Variable Models
Analysis of multivariate data using generalized linear latent variable models (gllvm). Estimation i ...
Download / Learn more Package Citations See dependency  

23,990

R Packages

207,311

Dependencies

64,809

Author Associations

23,991

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA