R package citation, R package reverse dependencies, R package scholars, install an r package from GitHub hy is package acceptance pending why is package undeliverable amazon why is package on hold dhl tour packages why in r package r and r package full form why is r free why r is bad which r package to install which r package has which r package which r package version which r package readxl which r package ggplot which r package fread which r package license where is package.json where is package-lock.json where is package.swift where is package explorer in eclipse where is package where is package manager unity where is package installer android where is package manager console in visual studio who r package which r package to install which r package version who is package who is package deal who is package design r and r package full form r and r package meaning what r package has what package r what is package in java what is package what is package-lock.json what is package in python what is package.json what is package installer do r package can't install r packages r can't find package r can't load package can't load xlsx package r can't install psych package r can't install sf package r Write if else in NONMEM pk pd
otuSummary
View on CRAN: Click
here
Download and install otuSummary package within the R console
Install from CRAN:
install.packages("otuSummary")
Install from Github:
library("remotes")
install_github("cran/otuSummary")
Install by package version:
library("remotes")
install_version("otuSummary", "0.1.2")
Attach the package and use:
library("otuSummary")
Maintained by
Sizhong Yang
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-06-19
Latest Update: 2023-09-05
Description:
Summarizes the taxonomic composition, diversity contribution of the rare and abundant community by using OTU (operational taxonomic unit) table which was generated by analyzing pipeline of 'QIIME' or 'mothur'. The rare biosphere in this package is subset by the relative abundance threshold (for details about rare biosphere please see Lynch and Neufeld (2015) ).
How to cite:
Sizhong Yang (2018). otuSummary: Summarizing OTU Table Regarding the Composition, Abundance and Beta Diversity of Abundant and Rare Biospheres. R package version 0.1.2, https://cran.r-project.org/web/packages/otuSummary. Accessed 21 Nov. 2024.
Other packages that cited otuSummary R package
View otuSummary citation profile
Other R packages that otuSummary depends,
imports, suggests or enhances
Complete documentation for otuSummary
Functions, R codes and Examples using
the otuSummary R package
Some associated functions: alphaDiversity . bplot . calc_bc . contrib . fillTax . fillTax2 . matrixConvert . otu4type . otuCollap . otuReport . otumothur . otuqiime . pbray . rareBiosphere . slimTax . subOTU . typeConvert .
Some associated R codes: MEAN.R . SUM.R . SWEEP.R . alphaDiversity.R . bplot.R . calc_bc.R . calc_chao1.R . calc_chao2.R . calc_shannon.R . calc_simpson.R . contrib.R . fillTax.R . fillTax2.R . matrixConvert.R . otuCollap.R . otuReport.R . pbray.R . rareBiosphere.R . seperation.R . slimTax.R . subOTU.R . typeConvert.R . Full otuSummary package functions and examples
Downloads during the last 30 days
Get rewarded with contribution points by
helping add
Reviews / comments / questions /suggestions ↴↴↴
Today's Hot Picks in Authors and Packages
crossrun
Joint distribution of number of crossings and the
longest run in a series of independent Bernoulli ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Tore Wentzel-Larsen (view profile)
kgschart
Restore underlining numeric data from rating history graph of
KGS (an online platform of the game o ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Kota Mori (view profile)
r2resize
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Obinna Obianom (view profile)
RcppHNSW
'Hnswlib' is a C++ library for Approximate Nearest Neighbors.
This package provides a minimal R int ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: James Melville (view profile)
deductive
Attempt to repair inconsistencies and missing values in
data records by using information from vali ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Mark van der Loo (view profile)
SCBiclust
Identifies a bicluster, a submatrix of the data such that the features and observations within the s ...
Download / Learn more Package Citations See dependency
Download / Learn more Package Citations See dependency
Maintainer: Erika S. Helgeson (view profile)