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optimos.prime
View on CRAN: Click
here
Download and install optimos.prime package within the R console
Install from CRAN:
install.packages("optimos.prime")
Install from Github:
library("remotes")
install_github("cran/optimos.prime")
Install by package version:
library("remotes")
install_version("optimos.prime", "0.1.2")
Attach the package and use:
library("optimos.prime")
Maintained by
Joaquín Cochero
[Scholar Profile | Author Map]
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-02-18
Latest Update: 2020-01-29
Description:
Calculates autoecological data (optima and tolerance ranges) of a biological species
given an environmental matrix. The package calculates by weighted averaging, using the number of occurrences to adjust the
tolerance assigned to each taxon to estimate optima and tolerance range in cases where taxa
have unequal occurrences. See the detailed methodology by Birks et al. (1990) , and a
case example by Potapova and Charles (2003) .
How to cite:
Joaquín Cochero (2019). optimos.prime: Optimos Prime Helps Calculate Autoecological Data for Biological Species. R package version 0.1.2, https://cran.r-project.org/web/packages/optimos.prime
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imports, suggests or enhances
Functions, R codes and Examples using
the optimos.prime R package
Some associated functions: environmental_data_example_2 . environmental_df . op_calculate . op_lists . op_plot . optimos.prime . species_data_example_2 . species_df .
Some associated R codes: data.R . op_calculate.R . op_lists.R . op_plot.R . optimos.prime.R . Full optimos.prime package functions and examples
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