Other packages > Find by keyword >

ofGEM  

A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data
View on CRAN: Click here


Download and install ofGEM package within the R console
Install from CRAN:
install.packages("ofGEM")

Install from Github:
library("remotes")
install_github("cran/ofGEM")

Install by package version:
library("remotes")
install_version("ofGEM", "1.0")



Attach the package and use:
library("ofGEM")
Maintained by
Jiebiao Wang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-07-13
Latest Update: 2018-07-13
Description:
Offers a gene-based meta-analysis test with filtering to detect gene-environment interactions (GxE) with association data, proposed by Wang et al. (2018) . It first conducts a meta-filtering test to filter out unpromising SNPs by combining all samples in the consortia data. It then runs a test of omnibus-filtering-based GxE meta-analysis (ofGEM) that combines the strengths of the fixed- and random-effects meta-analysis with meta-filtering. It can also analyze data from multiple ethnic groups.
How to cite:
Jiebiao Wang (2018). ofGEM: A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data. R package version 1.0, https://cran.r-project.org/web/packages/ofGEM. Accessed 15 Jul. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited ofGEM R package
View ofGEM citation profile
Other R packages that ofGEM depends, imports, suggests or enhances
Complete documentation for ofGEM
Functions, R codes and Examples using the ofGEM R package
Some associated functions: forest_plot . ofGEM . sim_dat . 
Some associated R codes: Full ofGEM package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
gscaLCA  
Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
Execute Latent Class Analysis (LCA) and Latent Class Regression (LCR) by using Generalized Structu ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA