Other packages > Find by keyword >

ofGEM  

A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data
View on CRAN: Click here


Download and install ofGEM package within the R console
Install from CRAN:
install.packages("ofGEM")

Install from Github:
library("remotes")
install_github("cran/ofGEM")

Install by package version:
library("remotes")
install_version("ofGEM", "1.0")



Attach the package and use:
library("ofGEM")
Maintained by
Jiebiao Wang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-07-13
Latest Update: 2018-07-13
Description:
Offers a gene-based meta-analysis test with filtering to detect gene-environment interactions (GxE) with association data, proposed by Wang et al. (2018) . It first conducts a meta-filtering test to filter out unpromising SNPs by combining all samples in the consortia data. It then runs a test of omnibus-filtering-based GxE meta-analysis (ofGEM) that combines the strengths of the fixed- and random-effects meta-analysis with meta-filtering. It can also analyze data from multiple ethnic groups.
How to cite:
Jiebiao Wang (2018). ofGEM: A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data. R package version 1.0, https://cran.r-project.org/web/packages/ofGEM. Accessed 04 Jun. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited ofGEM R package
View ofGEM citation profile
Other R packages that ofGEM depends, imports, suggests or enhances
Complete documentation for ofGEM
Functions, R codes and Examples using the ofGEM R package
Some associated functions: forest_plot . ofGEM . sim_dat . 
Some associated R codes: Full ofGEM package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

phers  
Calculate Phenotype Risk Scores
Use phenotype risk scores based on linked clinical and genetic data to study Mendelian disease and ...
Download / Learn more Package Citations See dependency  
murphydiagram  
Murphy Diagrams for Forecast Comparisons
Data and code for the paper by Ehm, Gneiting, Jordan and Krueger ('Of Quantiles and Expectiles: Con ...
Download / Learn more Package Citations See dependency  
shinybusy  
Busy Indicators and Notifications for 'Shiny' Applications
Add indicators (spinner, progress bar, gif) in your 'shiny' applications to show the user that the ...
Download / Learn more Package Citations See dependency  
crplyr  
A 'dplyr' Interface for Crunch
In order to facilitate analysis of datasets hosted on the Crunch data platform ...
Download / Learn more Package Citations See dependency  
golem  
A Framework for Robust Shiny Applications
An opinionated framework for building a production-ready 'Shiny' application. This package contains ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  

27,268

R Packages

233,548

Dependencies

72,590

Author Associations

27,205

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA