Other packages > Find by keyword >

ofGEM  

A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data
View on CRAN: Click here


Download and install ofGEM package within the R console
Install from CRAN:
install.packages("ofGEM")

Install from Github:
library("remotes")
install_github("cran/ofGEM")

Install by package version:
library("remotes")
install_version("ofGEM", "1.0")



Attach the package and use:
library("ofGEM")
Maintained by
Jiebiao Wang
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2018-07-13
Latest Update: 2018-07-13
Description:
Offers a gene-based meta-analysis test with filtering to detect gene-environment interactions (GxE) with association data, proposed by Wang et al. (2018) . It first conducts a meta-filtering test to filter out unpromising SNPs by combining all samples in the consortia data. It then runs a test of omnibus-filtering-based GxE meta-analysis (ofGEM) that combines the strengths of the fixed- and random-effects meta-analysis with meta-filtering. It can also analyze data from multiple ethnic groups.
How to cite:
Jiebiao Wang (2018). ofGEM: A Meta-Analysis Approach with Filtering for Identifying Gene-Level Gene-Environment Interactions with Genetic Association Data. R package version 1.0, https://cran.r-project.org/web/packages/ofGEM. Accessed 06 Mar. 2026.
Previous versions and publish date:
No previous versions
Other packages that cited ofGEM R package
View ofGEM citation profile
Other R packages that ofGEM depends, imports, suggests or enhances
Complete documentation for ofGEM
Functions, R codes and Examples using the ofGEM R package
Some associated functions: forest_plot . ofGEM . sim_dat . 
Some associated R codes: Full ofGEM package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

mlr3viz  
Visualizations for 'mlr3'
Visualization package of the 'mlr3' ecosystem. It features plots for mlr3 objects such as tasks, le ...
Download / Learn more Package Citations See dependency  
solitude  
An Implementation of Isolation Forest
Isolation forest is anomaly detection method introduced by the paper Isolation based Anomaly Detecti ...
Download / Learn more Package Citations See dependency  
DatabionicSwarm  
Swarm Intelligence for Self-Organized Clustering
Algorithms implementing populations of agents that interact with one another and sense their environ ...
Download / Learn more Package Citations See dependency  
lbfgs  
Limited-memory BFGS Optimization
A wrapper built around the libLBFGS optimization library by Naoaki Okazaki. The lbfgs package implem ...
Download / Learn more Package Citations See dependency  
EMVS  
The Expectation-Maximization Approach to Bayesian Variable Selection
An efficient expectation-maximization algorithm for fitting Bayesian spike-and-slab regularization p ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  

26,264

R Packages

223,360

Dependencies

70,244

Author Associations

26,265

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA