Other packages > Find by keyword >

odin  

ODE Generation and Integration
View on CRAN: Click here


Download and install odin package within the R console
Install from CRAN:
install.packages("odin")

Install from Github:
library("remotes")
install_github("cran/odin")

Install by package version:
library("remotes")
install_version("odin", "1.2.7")



Attach the package and use:
library("odin")
Maintained by
Rich FitzJohn
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2019-07-02
Latest Update: 2025-02-07
Description:
Generate systems of ordinary differential equations (ODE) and integrate them, using a domain specific language (DSL). The DSL uses R's syntax, but compiles to C in order to efficiently solve the system. A solver is not provided, but instead interfaces to the packages 'deSolve' and 'dde' are generated. With these, while solving the differential equations, no allocations are done and the calculations remain entirely in compiled code. Alternatively, a model can be transpiled to R for use in contexts where a C compiler is not present. After compilation, models can be inspected to return information about parameters and outputs, or intermediate values after calculations. 'odin' is not targeted at any particular domain and is suitable for any system that can be expressed primarily as mathematical expressions. Additional support is provided for working with delays (delay differential equations, DDE), using interpolated functions during interpolation, and for integrating quantities that represent arrays.
How to cite:
Rich FitzJohn (2019). odin: ODE Generation and Integration. R package version 1.2.7, https://cran.r-project.org/web/packages/odin. Accessed 09 Mar. 2026.
Previous versions and publish date:
1.0.1 (2019-07-02 11:00), 1.0.8 (2020-10-28 16:00), 1.2.0 (2021-07-07 11:20), 1.2.1 (2021-07-14 14:30), 1.2.4 (2022-04-28 10:50), 1.2.5 (2023-10-02 15:40), 1.2.6 (2024-09-23 18:10)
Other packages that cited odin R package
View odin citation profile
Other R packages that odin depends, imports, suggests or enhances
Complete documentation for odin
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
ggblanket  
Simplify 'ggplot2' Visualisation
Simplify 'ggplot2' visualisation with 'ggblanket' wrapper functions. ...
Download / Learn more Package Citations See dependency  
pooling  
Fit Poolwise Regression Models
Functions for calculating power and fitting regression models in studies where a biomarker is measur ...
Download / Learn more Package Citations See dependency  
Rgb  
The R Genome Browser
Classes and methods to efficiently handle (slice, annotate, draw ...) genomic features (such as gene ...
Download / Learn more Package Citations See dependency  
rzentra  
Client for the 'ZENTRA Cloud' API
Provides functionality to read settings, statuses and readings of weather stations from the 'ZENTRA ...
Download / Learn more Package Citations See dependency  

26,293

R Packages

225,784

Dependencies

70,376

Author Associations

26,294

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA