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o2ools  

Tools for 'outbreaker2'
View on CRAN: Click here


Download and install o2ools package within the R console
Install from CRAN:
install.packages("o2ools")

Install from Github:
library("remotes")
install_github("cran/o2ools")

Install by package version:
library("remotes")
install_version("o2ools", "0.0.1")



Attach the package and use:
library("o2ools")
Maintained by
Cyril Geismar
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2025-06-06
Latest Update: 2025-06-06
Description:
Streamlines the post-processing, summarization, and visualization of 'outbreaker2' output via a suite of helper functions. Facilitates tidy manipulation of posterior samples, integration with case metadata, generation of diagnostic plots and summary statistics.
How to cite:
Cyril Geismar (2025). o2ools: Tools for 'outbreaker2'. R package version 0.0.1, https://cran.r-project.org/web/packages/o2ools. Accessed 04 Jul. 2026.
Previous versions and publish date:
No previous versions
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Complete documentation for o2ools
Functions, R codes and Examples using the o2ools R package
Full o2ools package functions and examples
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