Other packages > Find by keyword >

nimbleSCR  

Spatial Capture-Recapture (SCR) Methods Using 'nimble'
View on CRAN: Click here


Download and install nimbleSCR package within the R console
Install from CRAN:
install.packages("nimbleSCR")

Install from Github:
library("remotes")
install_github("cran/nimbleSCR")

Install by package version:
library("remotes")
install_version("nimbleSCR", "0.2.1")



Attach the package and use:
library("nimbleSCR")
Maintained by
Daniel Turek
[Scholar Profile | Author Map]
First Published: 2020-08-20
Latest Update: 2022-11-30
Description:
Provides utility functions, distributions, and fitting methods for Bayesian Spatial Capture-Recapture (SCR) and Open Population Spatial Capture-Recapture (OPSCR) modelling using the nimble package (de Valpine et al. 2017 ). Development of the package was motivated primarily by the need for flexible and efficient analysis of large-scale SCR data (Bischof et al. 2020 ). Computational methods and techniques implemented in nimbleSCR include those discussed in Turek et al. 2021 ; among others. For a recent application of nimbleSCR, see Milleret et al. (2021) .
How to cite:
Daniel Turek (2020). nimbleSCR: Spatial Capture-Recapture (SCR) Methods Using 'nimble'. R package version 0.2.1, https://cran.r-project.org/web/packages/nimbleSCR. Accessed 01 May. 2025.
Previous versions and publish date:
0.1.0 (2020-08-20 11:20), 0.1.1 (2021-01-07 21:30), 0.1.2 (2021-07-01 22:20), 0.1.3 (2021-10-25 17:50), 0.2.0 (2022-09-02 12:40)
Other packages that cited nimbleSCR R package
View nimbleSCR citation profile
Other R packages that nimbleSCR depends, imports, suggests or enhances
Complete documentation for nimbleSCR
Functions, R codes and Examples using the nimbleSCR R package
Some associated functions: calcWindowSizes . calculateDensity . dDispersal_exp . dHabitatMask . dbernppAC . dbernppACmovement_exp . dbernppACmovement_normal . dbernppDetection_normal . dbernppLocalACmovement_exp . dbernppLocalACmovement_normal . dbernppLocalDetection_normal . dbinomLocal_exp . dbinomLocal_normal . dbinomLocal_normalPlateau . dbinom_vector . dcatState1Alive1Dead . dcatState1Alive2Dead . dcatState2Alive2Dead . dmultiLocal_normal . dnormalizer . dpoisLocal_normal . dpoisppAC . dpoisppDetection_normal . dpoisppLocalDetection_normal . getHomeRangeArea . getLocalObjects . getMidPointNodes . getSparseY . getWindowCoords . getWindowIndex . integrateIntensityLocal_exp . integrateIntensityLocal_normal . integrateIntensity_exp . integrateIntensity_normal . localTrapCalculations . makeConstantNimbleFunction . marginalVoidProbIntegrand . marginalVoidProbNumIntegration . sampler_categorical_general . scaleCoordsToHabitatGrid . stratRejectionSampler_exp . stratRejectionSampler_normal . 
Some associated R codes: calcWindowSizes.R . calculateDensity.R . dDispersal_exp.R . dHabitatMask.R . dbernppAC.R . dbernppACmovement_exp.R . dbernppACmovement_normal.R . dbernppDetection_normal.R . dbernppLocalACmovement_exp.R . dbernppLocalACmovement_normal.R . dbernppLocalDetection_normal.R . dbinomLocal_exp.R . dbinomLocal_normal.R . dbinomLocal_normalPlateau.R . dbinom_vector.R . dcatState1Alive1Dead.R . dcatState1Alive2Dead.R . dcatState2Alive2Dead.R . dmultiLocal_normal.R . dnormalizer.R . dpoisLocal_normal.R . dpoisppAC.R . dpoisppDetection_normal.R . dpoisppLocalDetection_normal.R . getHomeRangeArea.R . getLocalObjects.R . getMidPointNodes.R . getSparseY.R . getWindowCoords.R . getWindowIndex.R . integrateIntensityLocal_exp.R . integrateIntensityLocal_normal.R . integrateIntensity_exp.R . integrateIntensity_normal.R . localTrapCalculations.R . makeConstantNimbleFunction.R . marginalVoidProbIntegrand.R . marginalVoidProbNumIntegration.R . sampler_categorical_general.R . scaleCoordsToHabitatGrid.R . stratRejectionSampler_exp.R . stratRejectionSampler_normal.R . zzz.R .  Full nimbleSCR package functions and examples
Downloads during the last 30 days
04/0104/0204/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/30Downloads for nimbleSCR02468101214161820222426TrendBars

Today's Hot Picks in Authors and Packages

dsm  
Density Surface Modelling of Distance Sampling Data
Density surface modelling of line transect data. A Generalized Additive Model-based approach is use ...
Download / Learn more Package Citations See dependency  
geofabrik  
Downloading Open Street Map Data
Download OpenStreetMap data from geofabrik servers httpsdownload.geofabrik.de. This approach usesonl ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
pander  
An R 'Pandoc' Writer
Contains some functions catching all messages, 'stdout' and other useful information while evaluati ...
Download / Learn more Package Citations See dependency  
representr  
Create Representative Records After Entity Resolution
An implementation of Kaplan, Betancourt, Steorts (2022) that cre ...
Download / Learn more Package Citations See dependency  
dCUR  
Dimension Reduction with Dynamic CUR
Dynamic CUR (dCUR) boosts the CUR decomposition (Mahoney MW., Drineas P. (2009) ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,176

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA