Other packages > Find by keyword >

nimbleSCR  

Spatial Capture-Recapture (SCR) Methods Using 'nimble'
View on CRAN: Click here


Download and install nimbleSCR package within the R console
Install from CRAN:
install.packages("nimbleSCR")

Install from Github:
library("remotes")
install_github("cran/nimbleSCR")

Install by package version:
library("remotes")
install_version("nimbleSCR", "0.2.1")



Attach the package and use:
library("nimbleSCR")
Maintained by
Daniel Turek
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-08-20
Latest Update: 2022-11-30
Description:
Provides utility functions, distributions, and fitting methods for Bayesian Spatial Capture-Recapture (SCR) and Open Population Spatial Capture-Recapture (OPSCR) modelling using the nimble package (de Valpine et al. 2017 ). Development of the package was motivated primarily by the need for flexible and efficient analysis of large-scale SCR data (Bischof et al. 2020 ). Computational methods and techniques implemented in nimbleSCR include those discussed in Turek et al. 2021 ; among others. For a recent application of nimbleSCR, see Milleret et al. (2021) .
How to cite:
Daniel Turek (2020). nimbleSCR: Spatial Capture-Recapture (SCR) Methods Using 'nimble'. R package version 0.2.1, https://cran.r-project.org/web/packages/nimbleSCR. Accessed 15 Jul. 2026.
Previous versions and publish date:
(2026-07-09 06:24), 0.1.0 (2020-08-20 11:20), 0.1.1 (2021-01-07 21:30), 0.1.2 (2021-07-01 22:20), 0.1.3 (2021-10-25 17:50), 0.2.0 (2022-09-02 12:40)
Other packages that cited nimbleSCR R package
View nimbleSCR citation profile
Other R packages that nimbleSCR depends, imports, suggests or enhances
Complete documentation for nimbleSCR
Functions, R codes and Examples using the nimbleSCR R package
Some associated functions: calcWindowSizes . calculateDensity . dDispersal_exp . dHabitatMask . dbernppAC . dbernppACmovement_exp . dbernppACmovement_normal . dbernppDetection_normal . dbernppLocalACmovement_exp . dbernppLocalACmovement_normal . dbernppLocalDetection_normal . dbinomLocal_exp . dbinomLocal_normal . dbinomLocal_normalPlateau . dbinom_vector . dcatState1Alive1Dead . dcatState1Alive2Dead . dcatState2Alive2Dead . dmultiLocal_normal . dnormalizer . dpoisLocal_normal . dpoisppAC . dpoisppDetection_normal . dpoisppLocalDetection_normal . getHomeRangeArea . getLocalObjects . getMidPointNodes . getSparseY . getWindowCoords . getWindowIndex . integrateIntensityLocal_exp . integrateIntensityLocal_normal . integrateIntensity_exp . integrateIntensity_normal . localTrapCalculations . makeConstantNimbleFunction . marginalVoidProbIntegrand . marginalVoidProbNumIntegration . sampler_categorical_general . scaleCoordsToHabitatGrid . stratRejectionSampler_exp . stratRejectionSampler_normal . 
Some associated R codes: calcWindowSizes.R . calculateDensity.R . dDispersal_exp.R . dHabitatMask.R . dbernppAC.R . dbernppACmovement_exp.R . dbernppACmovement_normal.R . dbernppDetection_normal.R . dbernppLocalACmovement_exp.R . dbernppLocalACmovement_normal.R . dbernppLocalDetection_normal.R . dbinomLocal_exp.R . dbinomLocal_normal.R . dbinomLocal_normalPlateau.R . dbinom_vector.R . dcatState1Alive1Dead.R . dcatState1Alive2Dead.R . dcatState2Alive2Dead.R . dmultiLocal_normal.R . dnormalizer.R . dpoisLocal_normal.R . dpoisppAC.R . dpoisppDetection_normal.R . dpoisppLocalDetection_normal.R . getHomeRangeArea.R . getLocalObjects.R . getMidPointNodes.R . getSparseY.R . getWindowCoords.R . getWindowIndex.R . integrateIntensityLocal_exp.R . integrateIntensityLocal_normal.R . integrateIntensity_exp.R . integrateIntensity_normal.R . localTrapCalculations.R . makeConstantNimbleFunction.R . marginalVoidProbIntegrand.R . marginalVoidProbNumIntegration.R . sampler_categorical_general.R . scaleCoordsToHabitatGrid.R . stratRejectionSampler_exp.R . stratRejectionSampler_normal.R . zzz.R .  Full nimbleSCR package functions and examples
Downloads during the last 30 days

Today's Hot Picks in Authors and Packages

PermAlgo  
Permutational Algorithm to Simulate Survival Data
This version of the permutational algorithm generates a dataset in which event and censoring times ...
Download / Learn more Package Citations See dependency  
gscaLCA  
Generalized Structure Component Analysis- Latent Class Analysis & Latent Class Regression
Execute Latent Class Analysis (LCA) and Latent Class Regression (LCR) by using Generalized Structu ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
footBayes  
Fitting Bayesian and MLE Football Models
This is the first package allowing for the estimation, visualization and prediction of the most wel ...
Download / Learn more Package Citations See dependency  
gamlss.add  
Extra Additive Terms for Generalized Additive Models for Location Scale and Shape
Interface for extra smooth functions including tensor products, neural networks and decision trees. ...
Download / Learn more Package Citations See dependency  
binhf  
Haar-Fisz Functions for Binomial Data
Binomial Haar-Fisz transforms for Gaussianization as in Nunes and Nason (2009). ...
Download / Learn more Package Citations See dependency  

27,806

R Packages

239,283

Dependencies

73,837

Author Associations

27,807

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA