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nichevol  

Tools for Ecological Niche Evolution Assessment Considering Uncertainty
View on CRAN: Click here


Download and install nichevol package within the R console
Install from CRAN:
install.packages("nichevol")

Install from Github:
library("remotes")
install_github("cran/nichevol")

Install by package version:
library("remotes")
install_version("nichevol", "0.1.20")



Attach the package and use:
library("nichevol")
Maintained by
Marlon E. Cobos
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2020-03-02
Latest Update: 2023-03-10
Description:
A collection of tools that allow users to perform critical steps in the process of assessing ecological niche evolution over phylogenies, with uncertainty incorporated explicitly in reconstructions. The method proposed here for ancestral reconstruction of ecological niches characterizes species' niches using a bin-based approach that incorporates uncertainty in estimations. Compared to other existing methods, the approaches presented here reduce risk of overestimation of amounts and rates of ecological niche evolution. The main analyses include: initial exploration of environmental data in occurrence records and accessible areas, preparation of data for phylogenetic analyses, executing comparative phylogenetic analyses of ecological niches, and plotting for interpretations. Details on the theoretical background and methods used can be found in: Owens et al. (2020) , Peterson et al. (1999) , Sober
How to cite:
Marlon E. Cobos (2020). nichevol: Tools for Ecological Niche Evolution Assessment Considering Uncertainty. R package version 0.1.20, https://cran.r-project.org/web/packages/nichevol. Accessed 07 Nov. 2024.
Previous versions and publish date:
0.1.19 (2020-03-02 12:00)
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