Other packages > Find by keyword >

nicheROVER  

Niche Region and Niche Overlap Metrics for Multidimensional Ecological Niches
View on CRAN: Click here


Download and install nicheROVER package within the R console
Install from CRAN:
install.packages("nicheROVER")

Install from Github:
library("remotes")
install_github("cran/nicheROVER")

Install by package version:
library("remotes")
install_version("nicheROVER", "1.1.2")



Attach the package and use:
library("nicheROVER")
Maintained by
Martin Lysy
[Scholar Profile | Author Map]
First Published: 2014-07-25
Latest Update: 2023-10-13
Description:
Implementation of a probabilistic method to calculate 'nicheROVER' (_niche_ _r_egion and niche _over_lap) metrics using multidimensional niche indicator data (e.g., stable isotopes, environmental variables, etc.). The niche region is defined as the joint probability density function of the multidimensional niche indicators at a user-defined probability alpha (e.g., 95%). Uncertainty is accounted for in a Bayesian framework, and the method can be extended to three or more indicator dimensions. It provides directional estimates of niche overlap, accounts for species-specific distributions in multivariate niche space, and produces unique and consistent bivariate projections of the multivariate niche region. The article by Swanson et al. (2015) provides a detailed description of the methodology. See the package vignette for a worked example using fish stable isotope data.
How to cite:
Martin Lysy (2014). nicheROVER: Niche Region and Niche Overlap Metrics for Multidimensional Ecological Niches. R package version 1.1.2, https://cran.r-project.org/web/packages/nicheROVER. Accessed 02 May. 2025.
Previous versions and publish date:
1.0 (2014-07-25 21:16), 1.1.0 (2021-06-03 20:10)
Other packages that cited nicheROVER R package
View nicheROVER citation profile
Other R packages that nicheROVER depends, imports, suggests or enhances
Complete documentation for nicheROVER
Downloads during the last 30 days
04/0204/0304/0404/0504/0604/0704/0804/0904/1004/1104/1204/1304/1404/1504/1604/1704/1804/1904/2004/2104/2204/2304/2404/2504/2604/2704/2804/2904/30Downloads for nicheROVER051015202530TrendBars

Today's Hot Picks in Authors and Packages

quotedargs  
A Way of Writing Functions that Quote their Arguments
A facility for writing functions that quote their arguments, may sometimes evaluate them in the env ...
Download / Learn more Package Citations See dependency  
disprofas  
Non-Parametric Dissolution Profile Analysis
Similarity of dissolution profiles is assessed using the similarity factor f2 according to the EMA ...
Download / Learn more Package Citations See dependency  
nextGenShinyApps  
Craft Exceptional 'R Shiny' Applications and Dashboards with Novel Responsive Tools
Nove responsive tools for designing and developing 'Shiny' dashboards and applications. The scripts ...
Download / Learn more Package Citations See dependency  
contFracR  
Continued Fraction Generators and Evaluators
Converts numbers to continued fractions and back again. A solver for Pell's Equation is provided. T ...
Download / Learn more Package Citations See dependency  
frailtypack  
Shared, Joint (Generalized) Frailty Models; Surrogate Endpoints
The following several classes of frailty models using a penalized likelihood estimation on the hazar ...
Download / Learn more Package Citations See dependency  
nlsem  
Fitting Structural Equation Mixture Models
Estimation of structural equation models with nonlinear effects and underlying nonnormal distributi ...
Download / Learn more Package Citations See dependency  

24,142

R Packages

207,311

Dependencies

65,176

Author Associations

24,143

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA