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netassoc  

Inference of Species Associations from Co-Occurrence Data
View on CRAN: Click here


Download and install netassoc package within the R console
Install from CRAN:
install.packages("netassoc")

Install from Github:
library("remotes")
install_github("cran/netassoc")

Install by package version:
library("remotes")
install_version("netassoc", "0.7.2")



Attach the package and use:
library("netassoc")
Maintained by
Benjamin Blonder
[Scholar Profile | Author Map]
All associated links for this package
First Published: 2015-01-31
Latest Update: 2025-09-01
Description:
Infers species associations from community matrices. Uses local and (optional) regional-scale co-occurrence data by comparing observed partial correlation coefficients between species to those estimated from regional species distributions. Extends Gaussian graphical models to a null modeling framework. Provides interface to a variety of inverse covariance matrix estimation methods.
How to cite:
Benjamin Blonder (2015). netassoc: Inference of Species Associations from Co-Occurrence Data. R package version 0.7.2, https://cran.r-project.org/web/packages/netassoc. Accessed 06 Mar. 2026.
Previous versions and publish date:
0.4.1 (2015-01-31 08:31), 0.4.3 (2015-03-13 20:22), 0.4.7 (2015-06-24 18:23), 0.6.0 (2015-09-09 21:19), 0.6.2 (2015-11-24 07:46), 0.6.3 (2017-06-05 23:44), 0.7.0 (2022-07-20 16:30), 0.7.1 (2025-07-21 19:20)
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Complete documentation for netassoc
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