Other packages > Find by keyword >

nebula  

Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data
View on CRAN: Click here


Download and install nebula package within the R console
Install from CRAN:
install.packages("nebula")

Install from Github:
library("remotes")
install_github("cran/nebula")

Install by package version:
library("remotes")
install_version("nebula", "1.5.3")



Attach the package and use:
library("nebula")
Maintained by
Liang He
[Scholar Profile | Author Map]
First Published: 2022-01-21
Latest Update: 2024-02-15
Description:
A fast negative binomial mixed model for conducting association analysis of multi-subject single-cell data. It can be used for identifying marker genes, differential expression and co-expression analyses. The model includes subject-level random effects to account for the hierarchical structure in multi-subject single-cell data. See He et al. (2021) .
How to cite:
Liang He (2022). nebula: Negative Binomial Mixed Models Using Large-Sample Approximation for Differential Expression Analysis of ScRNA-Seq Data. R package version 1.5.3, https://cran.r-project.org/web/packages/nebula. Accessed 07 Apr. 2025.
Previous versions and publish date:
1.2.0 (2022-01-21 10:02), 1.2.2 (2023-01-18 22:00), 1.4.2 (2023-07-06 01:20)
Other packages that cited nebula R package
View nebula citation profile
Other R packages that nebula depends, imports, suggests or enhances
Complete documentation for nebula
Functions, R codes and Examples using the nebula R package
Some associated functions: group_cell . nbresidual . nebula-package . nebula . sample_data . 
Some associated R codes: RcppExports.R . data.R . group_cell.R . nbresidual.R . nebula.R . pmg.R . pml.R . ptmg.R . utils.R .  Full nebula package functions and examples
Downloads during the last 30 days
03/0803/0903/1003/1103/1203/1303/1403/1503/1603/1703/1803/1903/2003/2103/2203/2303/2403/2503/2603/2703/2803/2903/3003/3104/0104/0204/0304/0404/05Downloads for nebula02468101214TrendBars

Today's Hot Picks in Authors and Packages

nutriNetwork  
Structure Learning with Copula Graphical Model
Statistical tool for learning the structure of direct associations among variables for continuous d ...
Download / Learn more Package Citations See dependency  
r2resize  
In-Text Resize for Images, Tables and Fancy Resize Containers in 'shiny', 'rmarkdown' and 'quarto' Documents
Automatic resizing toolbar for containers, images and tables. Various resizable or expandable contai ...
Download / Learn more Package Citations See dependency  
probout  
Unsupervised Multivariate Outlier Probabilities for Large Datasets
Estimates unsupervised outlier probabilities for multivariate numeric data with many observations fr ...
Download / Learn more Package Citations See dependency  
MetaAnalyser  
An Interactive Visualisation of Meta-Analysis as a Physical Weighing Machine
An interactive application to visualise meta-analysis data as a physical weighing machine. The inte ...
Download / Learn more Package Citations See dependency  
letsR  
Data Handling and Analysis in Macroecology
Handling, processing, and analyzing geographic data on species' distributions and environmental var ...
Download / Learn more Package Citations See dependency  
ASMap  
Linkage Map Construction using the MSTmap Algorithm
Functions for Accurate and Speedy linkage map construction, manipulation and diagnosis of Doubled Ha ...
Download / Learn more Package Citations See dependency  

24,012

R Packages

207,311

Dependencies

64,867

Author Associations

24,013

Publication Badges

© Copyright since 2022. All right reserved, rpkg.net.  Based in Cambridge, Massachusetts, USA